Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 LINC00622-201ENST00000562811 1570 ntBASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 AL391361.1-201ENST00000405580 489 ntBASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 ZNF603P-201ENST00000405613 487 ntBASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 RPL23AP48-201ENST00000406913 488 ntBASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 MIR1911-201ENST00000410783 80 ntBASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 AC093162.1-201ENST00000419682 124 ntBASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 RBMY1KP-201ENST00000423480 476 ntBASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 RPS12P10-201ENST00000427031 377 ntBASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 NRBF2P3-201ENST00000432731 865 ntBASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 HMGB1P16-201ENST00000447155 540 ntBASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 TRY2P-201ENST00000448860 689 ntBASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 ABCF2P2-201ENST00000450549 296 ntBASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 OR52J1P-201ENST00000450596 932 ntBASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 AC012671.1-201ENST00000451912 203 ntBASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 RPL23AP23-201ENST00000452590 471 ntBASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 AC104689.1-201ENST00000473356 768 ntBASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 AP000926.1-201ENST00000479573 241 ntBASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 AC005351.1-201ENST00000511152 786 ntBASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 RPL23AP97-201ENST00000568955 471 ntBASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 AP000919.1-202ENST00000581139 1264 ntBASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 AC005191.1-201ENST00000603950 358 ntBASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 AC012603.1-201ENST00000606424 528 ntBASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 AL355802.4-201ENST00000607635 548 ntBASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 AC004825.2-201ENST00000616634 455 ntBASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 AC019278.1-201ENST00000623516 479 ntBASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 KARSP3-201ENST00000571212 1504 ntBASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
SND1-IT1Q9HBX3 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 AC018555.1-201ENST00000567548 1980 ntBASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 OR5T3-201ENST00000303059 1023 ntBASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 RNA5SP502-201ENST00000362694 119 ntBASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 RNA5SP391-201ENST00000363456 119 ntBASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 U8.4-201ENST00000363626 134 ntBASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 RNA5SP306-201ENST00000411087 107 ntBASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 RAC1P3-201ENST00000416129 580 ntBASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 AC007559.1-201ENST00000428736 355 ntBASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 AC016831.4-201ENST00000438302 307 ntBASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 AC007000.2-201ENST00000442564 487 ntBASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 ARL5AP2-201ENST00000444698 533 ntBASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 EIF2S2P2-201ENST00000447161 982 ntBASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 AC073850.1-201ENST00000449243 255 ntBASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 AL133477.1-201ENST00000457472 514 ntBASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 ALDH7A1P3-201ENST00000492517 345 ntBASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 AC007016.1-201ENST00000512110 244 ntBASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 RPL7L1P4-201ENST00000513004 707 ntBASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 BTF3P13-201ENST00000513224 490 ntBASIC2.91□□□□□ -1.94
SND1-IT1Q9HBX3 AC018797.3-201ENST00000513388 1241 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms