Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC084036.1-201ENST00000609190 508 ntBASIC5.06□□□□□ -1.6
UPF2Q9HAU5 AC004241.3-201ENST00000611728 517 ntBASIC5.06□□□□□ -1.6
UPF2Q9HAU5 MIR486-1-201ENST00000612171 68 ntBASIC5.06□□□□□ -1.6
UPF2Q9HAU5 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.06□□□□□ -1.6
UPF2Q9HAU5 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
UPF2Q9HAU5 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.06□□□□□ -1.6
UPF2Q9HAU5 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.06□□□□□ -1.6
UPF2Q9HAU5 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
UPF2Q9HAU5 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC5.06□□□□□ -1.6
UPF2Q9HAU5 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
UPF2Q9HAU5 AL356317.1-201ENST00000396110 1436 ntBASIC5.06□□□□□ -1.6
UPF2Q9HAU5 IDE-202ENST00000371581 4480 ntTSL 2 BASIC5.05□□□□□ -1.6
UPF2Q9HAU5 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC5.05□□□□□ -1.6
UPF2Q9HAU5 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
UPF2Q9HAU5 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
UPF2Q9HAU5 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
UPF2Q9HAU5 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.05□□□□□ -1.6
UPF2Q9HAU5 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.05□□□□□ -1.6
UPF2Q9HAU5 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
UPF2Q9HAU5 AL355143.1-201ENST00000407101 841 ntBASIC5.05□□□□□ -1.6
UPF2Q9HAU5 RPS26P13-201ENST00000419030 330 ntBASIC5.05□□□□□ -1.6
UPF2Q9HAU5 MORF4L1P7-201ENST00000426038 703 ntBASIC5.05□□□□□ -1.6
UPF2Q9HAU5 AL157831.1-201ENST00000426134 473 ntBASIC5.05□□□□□ -1.6
UPF2Q9HAU5 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.05□□□□□ -1.6
UPF2Q9HAU5 ATP5HP2-201ENST00000433885 485 ntBASIC5.05□□□□□ -1.6
UPF2Q9HAU5 AL359265.2-201ENST00000434367 631 ntBASIC5.05□□□□□ -1.6
UPF2Q9HAU5 AF228730.2-201ENST00000438784 848 ntBASIC5.05□□□□□ -1.6
UPF2Q9HAU5 RAB28P3-201ENST00000448325 597 ntBASIC5.05□□□□□ -1.6
UPF2Q9HAU5 RPL7P61-201ENST00000451721 751 ntBASIC5.05□□□□□ -1.6
UPF2Q9HAU5 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.05□□□□□ -1.6
UPF2Q9HAU5 AC092902.1-201ENST00000486999 259 ntBASIC5.05□□□□□ -1.6
UPF2Q9HAU5 RPL23AP72-201ENST00000492447 435 ntBASIC5.05□□□□□ -1.6
UPF2Q9HAU5 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.05□□□□□ -1.6
UPF2Q9HAU5 OR7H2P-201ENST00000513483 306 ntBASIC5.05□□□□□ -1.6
UPF2Q9HAU5 AC010342.1-201ENST00000514047 877 ntBASIC5.05□□□□□ -1.6
UPF2Q9HAU5 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.05□□□□□ -1.6
UPF2Q9HAU5 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.05□□□□□ -1.6
UPF2Q9HAU5 OR7E10P-201ENST00000526420 991 ntBASIC5.05□□□□□ -1.6
UPF2Q9HAU5 AC008147.3-201ENST00000548666 354 ntBASIC5.05□□□□□ -1.6
UPF2Q9HAU5 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.05□□□□□ -1.6
UPF2Q9HAU5 AC051619.2-201ENST00000559063 397 ntBASIC5.05□□□□□ -1.6
UPF2Q9HAU5 AC084783.1-201ENST00000565846 910 ntBASIC5.05□□□□□ -1.6
UPF2Q9HAU5 AC079171.1-201ENST00000568788 914 ntBASIC5.05□□□□□ -1.6
UPF2Q9HAU5 DNAJC19P3-201ENST00000594491 331 ntBASIC5.05□□□□□ -1.6
UPF2Q9HAU5 AC115286.1-201ENST00000604298 434 ntBASIC5.05□□□□□ -1.6
UPF2Q9HAU5 AL355816.2-201ENST00000610049 647 ntBASIC5.05□□□□□ -1.6
UPF2Q9HAU5 AP001002.2-201ENST00000625137 386 ntBASIC5.05□□□□□ -1.6
UPF2Q9HAU5 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
UPF2Q9HAU5 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
UPF2Q9HAU5 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
UPF2Q9HAU5 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
UPF2Q9HAU5 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
UPF2Q9HAU5 RAD17P1-201ENST00000418130 2042 ntBASIC5.04□□□□□ -1.6
UPF2Q9HAU5 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.04□□□□□ -1.6
UPF2Q9HAU5 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5.04□□□□□ -1.6
UPF2Q9HAU5 AL512430.2-201ENST00000406786 339 ntBASIC5.04□□□□□ -1.6
UPF2Q9HAU5 FAR2P2-201ENST00000413041 594 ntBASIC5.04□□□□□ -1.6
UPF2Q9HAU5 AL354692.1-201ENST00000423044 315 ntBASIC5.04□□□□□ -1.6
UPF2Q9HAU5 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.04□□□□□ -1.6
UPF2Q9HAU5 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.04□□□□□ -1.6
UPF2Q9HAU5 RPL23AP52-201ENST00000439311 478 ntBASIC5.04□□□□□ -1.6
UPF2Q9HAU5 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.04□□□□□ -1.6
UPF2Q9HAU5 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.04□□□□□ -1.6
UPF2Q9HAU5 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC5.04□□□□□ -1.6
UPF2Q9HAU5 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.04□□□□□ -1.6
UPF2Q9HAU5 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.04□□□□□ -1.6
UPF2Q9HAU5 AC096741.1-201ENST00000472250 846 ntBASIC5.04□□□□□ -1.6
UPF2Q9HAU5 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.04□□□□□ -1.6
UPF2Q9HAU5 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
UPF2Q9HAU5 SEC11B-201ENST00000518383 499 ntBASIC5.04□□□□□ -1.6
UPF2Q9HAU5 IGLVIV-53-201ENST00000520107 367 ntBASIC5.04□□□□□ -1.6
UPF2Q9HAU5 AC018442.3-201ENST00000523025 183 ntBASIC5.04□□□□□ -1.6
UPF2Q9HAU5 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.04□□□□□ -1.6
UPF2Q9HAU5 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.04□□□□□ -1.6
UPF2Q9HAU5 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
UPF2Q9HAU5 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.04□□□□□ -1.6
UPF2Q9HAU5 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.04□□□□□ -1.6
UPF2Q9HAU5 FAM106CP-201ENST00000582212 507 ntBASIC5.04□□□□□ -1.6
UPF2Q9HAU5 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.04□□□□□ -1.6
UPF2Q9HAU5 AC012409.3-201ENST00000611343 981 ntBASIC5.04□□□□□ -1.6
UPF2Q9HAU5 AL163051.2-201ENST00000618976 735 ntBASIC5.04□□□□□ -1.6
UPF2Q9HAU5 AL445528.2-201ENST00000620582 470 ntBASIC5.04□□□□□ -1.6
UPF2Q9HAU5 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.04□□□□□ -1.6
UPF2Q9HAU5 AP003499.2-201ENST00000624100 483 ntBASIC5.04□□□□□ -1.6
UPF2Q9HAU5 CASC19-222ENST00000641321 1173 ntBASIC5.04□□□□□ -1.6
UPF2Q9HAU5 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
UPF2Q9HAU5 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
UPF2Q9HAU5 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
UPF2Q9HAU5 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
UPF2Q9HAU5 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
UPF2Q9HAU5 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.03□□□□□ -1.6
UPF2Q9HAU5 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
UPF2Q9HAU5 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
UPF2Q9HAU5 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC5.03□□□□□ -1.6
UPF2Q9HAU5 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
UPF2Q9HAU5 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
UPF2Q9HAU5 RNA5SP322-201ENST00000363617 119 ntBASIC5.03□□□□□ -1.6
UPF2Q9HAU5 AC104297.1-201ENST00000393779 870 ntBASIC5.03□□□□□ -1.6
UPF2Q9HAU5 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
UPF2Q9HAU5 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms