Protein–RNA interactions for Protein: Q9BY60

GABARAPL3, Gamma-aminobutyric acid receptor-associated protein-like 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL3Q9BY60 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
GABARAPL3Q9BY60 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
GABARAPL3Q9BY60 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
GABARAPL3Q9BY60 DHX40P1-201ENST00000588725 1412 ntBASIC3.7□□□□□ -1.82
GABARAPL3Q9BY60 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
GABARAPL3Q9BY60 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 OR4K15-201ENST00000305051 1216 ntBASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 RNU6-666P-201ENST00000363499 107 ntBASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 RNA5SP435-201ENST00000364044 108 ntBASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 RNU6-40P-201ENST00000384254 107 ntBASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 RPS27AP11-201ENST00000402798 447 ntBASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 AL138878.1-201ENST00000405131 347 ntBASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 RHEBP3-201ENST00000411920 351 ntBASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 RPEP3-201ENST00000425462 676 ntBASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 AL365396.1-201ENST00000430854 671 ntBASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 AL358472.1-201ENST00000431295 329 ntBASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 AC011998.1-201ENST00000433403 117 ntBASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 HMGB3P9-201ENST00000441799 583 ntBASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 AC073648.4-201ENST00000442655 781 ntBASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 AC006011.1-201ENST00000442758 349 ntBASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 AF213884.1-201ENST00000488102 463 ntBASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 RPL35P6-201ENST00000490024 372 ntBASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 SUMO1P1-201ENST00000497904 306 ntBASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 AC004069.2-201ENST00000505438 1114 ntBASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 OR8G5-201ENST00000524943 1041 ntBASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 BRD9P1-201ENST00000529855 560 ntBASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 TRAV8-5-201ENST00000537369 341 ntBASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 AC008083.2-201ENST00000546707 476 ntBASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 AC133644.2-201ENST00000608142 540 ntBASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 AL023881.1-201ENST00000621088 301 ntBASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 AC116667.1-201ENST00000604855 2072 ntBASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
GABARAPL3Q9BY60 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 MIR423-201ENST00000362201 94 ntBASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 CCNB2P1-201ENST00000399411 1150 ntBASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 NCSTNP1-201ENST00000406229 144 ntBASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 Z86062.1-201ENST00000406773 777 ntBASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 NRBF2P2-201ENST00000413087 861 ntBASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 RPL6P29-201ENST00000414863 865 ntBASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 DPY19L1P2-201ENST00000426647 915 ntBASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 RPS26P47-201ENST00000427219 348 ntBASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 RPS27AP16-201ENST00000492222 470 ntBASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 RNA5SP49-201ENST00000516450 115 ntBASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 AP001922.4-201ENST00000526967 290 ntBASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 MIR5684-201ENST00000585074 65 ntBASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 AC123786.2-201ENST00000603459 275 ntBASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 AC012557.1-201ENST00000607115 611 ntBASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 AC239803.2-201ENST00000610161 430 ntBASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 AC078899.5-201ENST00000612475 178 ntBASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 AC015908.5-201ENST00000623289 343 ntBASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 AL158163.1-201ENST00000603915 1649 ntBASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 DDX6P1-205ENST00000441966 1436 ntBASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 AL359715.4-201ENST00000606629 1436 ntBASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.68□□□□□ -1.82
GABARAPL3Q9BY60 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
GABARAPL3Q9BY60 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
GABARAPL3Q9BY60 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
GABARAPL3Q9BY60 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
GABARAPL3Q9BY60 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
GABARAPL3Q9BY60 SNORD35B-201ENST00000363660 87 ntBASIC3.67□□□□□ -1.82
GABARAPL3Q9BY60 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.67□□□□□ -1.82
GABARAPL3Q9BY60 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.67□□□□□ -1.82
GABARAPL3Q9BY60 AC048351.1-201ENST00000420064 602 ntBASIC3.67□□□□□ -1.82
GABARAPL3Q9BY60 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
GABARAPL3Q9BY60 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms