Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 AC079298.1-201ENST00000625026 1619 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 Y_RNA.11-201ENST00000362375 109 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 RNU1-19P-201ENST00000363306 165 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 Y_RNA.465-201ENST00000384293 102 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 RNU6-171P-201ENST00000384354 107 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 MIR105-1-201ENST00000385222 81 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 RN7SKP33-201ENST00000410942 340 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 NUP35P2-201ENST00000416748 943 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 ATG4AP1-201ENST00000416893 538 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 AL139148.1-201ENST00000427122 680 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 AC138761.5-201ENST00000433967 325 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 NDUFB4P8-201ENST00000435351 367 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 AL662791.1-201ENST00000441992 928 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 SEPT14P24-201ENST00000447236 180 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 FAR2P1-206ENST00000449736 709 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 RN7SL799P-201ENST00000475891 298 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 UBA52P7-201ENST00000486088 380 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 AC072052.1-201ENST00000496556 306 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 RPS4XP20-201ENST00000505751 772 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 AC104090.1-201ENST00000506341 1171 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 AC010285.3-201ENST00000511668 676 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 AC074344.1-201ENST00000512823 224 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 AC025465.4-201ENST00000513422 638 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 PRELID3BP4-201ENST00000515476 571 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 AP001646.1-201ENST00000527936 915 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 OR5BC1P-201ENST00000529327 739 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 AC074029.1-201ENST00000552531 1044 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 AL358913.1-201ENST00000554342 121 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 AP000769.2-201ENST00000602344 396 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 AC013244.1-201ENST00000604279 193 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 AL592148.2-201ENST00000612210 372 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 AC090970.3-201ENST00000612566 866 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 AC135068.5-201ENST00000624197 983 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 AP003400.3-201ENST00000624904 346 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 AC100757.1-201ENST00000616872 1835 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 AL353796.1-201ENST00000561542 3241 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 MAPK10-328ENST00000641553 4009 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 AL354685.2-201ENST00000448218 1447 ntBASIC5.57□□□□□ -1.52
CDK5RAP1Q96SZ6 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDK5RAP1Q96SZ6 AC093849.1-201ENST00000563631 2209 ntBASIC5.56□□□□□ -1.52
CDK5RAP1Q96SZ6 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDK5RAP1Q96SZ6 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.56□□□□□ -1.52
CDK5RAP1Q96SZ6 AC011493.1-201ENST00000596753 1632 ntBASIC5.56□□□□□ -1.52
CDK5RAP1Q96SZ6 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDK5RAP1Q96SZ6 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDK5RAP1Q96SZ6 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
CDK5RAP1Q96SZ6 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
CDK5RAP1Q96SZ6 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CDK5RAP1Q96SZ6 AL391994.1-201ENST00000254724 282 ntBASIC5.56□□□□□ -1.52
CDK5RAP1Q96SZ6 RN7SKP153-201ENST00000365026 316 ntBASIC5.56□□□□□ -1.52
CDK5RAP1Q96SZ6 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.56□□□□□ -1.52
CDK5RAP1Q96SZ6 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDK5RAP1Q96SZ6 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CDK5RAP1Q96SZ6 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
CDK5RAP1Q96SZ6 MIR1277-201ENST00000408536 78 ntBASIC5.56□□□□□ -1.52
CDK5RAP1Q96SZ6 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.56□□□□□ -1.52
CDK5RAP1Q96SZ6 SEPT7P8-201ENST00000413308 775 ntBASIC5.56□□□□□ -1.52
CDK5RAP1Q96SZ6 OR51A5P-201ENST00000415429 942 ntBASIC5.56□□□□□ -1.52
CDK5RAP1Q96SZ6 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC5.56□□□□□ -1.52
CDK5RAP1Q96SZ6 RPL21P43-201ENST00000425440 472 ntBASIC5.56□□□□□ -1.52
CDK5RAP1Q96SZ6 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.56□□□□□ -1.52
CDK5RAP1Q96SZ6 RPL12P18-201ENST00000437175 325 ntBASIC5.56□□□□□ -1.52
CDK5RAP1Q96SZ6 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 1152.9 ms