Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AC012618.3-205ENST00000637896 1496 ntBASIC4.24□□□□□ -1.73
CCDC42Q96M95 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
CCDC42Q96M95 MIR383-201ENST00000362257 73 ntBASIC4.24□□□□□ -1.73
CCDC42Q96M95 SNORA58B-201ENST00000364259 136 ntBASIC4.24□□□□□ -1.73
CCDC42Q96M95 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CCDC42Q96M95 MIR192-201ENST00000384915 110 ntBASIC4.24□□□□□ -1.73
CCDC42Q96M95 MIR323B-201ENST00000385269 82 ntBASIC4.24□□□□□ -1.73
CCDC42Q96M95 HLFP1-201ENST00000402375 499 ntBASIC4.24□□□□□ -1.73
CCDC42Q96M95 AL138878.1-201ENST00000405131 347 ntBASIC4.24□□□□□ -1.73
CCDC42Q96M95 RPL23AP26-201ENST00000412728 464 ntBASIC4.24□□□□□ -1.73
CCDC42Q96M95 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC42Q96M95 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC42Q96M95 AC083863.1-201ENST00000438811 231 ntBASIC4.24□□□□□ -1.73
CCDC42Q96M95 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC42Q96M95 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC42Q96M95 MTND6P32-201ENST00000457611 483 ntBASIC4.24□□□□□ -1.73
CCDC42Q96M95 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.24□□□□□ -1.73
CCDC42Q96M95 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC42Q96M95 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC42Q96M95 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.24□□□□□ -1.73
CCDC42Q96M95 AC110743.1-201ENST00000584870 478 ntBASIC4.24□□□□□ -1.73
CCDC42Q96M95 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.24□□□□□ -1.73
CCDC42Q96M95 AP000843.1-201ENST00000624880 701 ntBASIC4.24□□□□□ -1.73
CCDC42Q96M95 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC42Q96M95 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC42Q96M95 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC42Q96M95 LARP1BP1-201ENST00000506036 1359 ntBASIC4.24□□□□□ -1.73
CCDC42Q96M95 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC42Q96M95 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CCDC42Q96M95 AC011155.1-201ENST00000316512 456 ntBASIC4.23□□□□□ -1.73
CCDC42Q96M95 RNU1-18P-201ENST00000363062 164 ntBASIC4.23□□□□□ -1.73
CCDC42Q96M95 RNA5SP399-201ENST00000364003 117 ntBASIC4.23□□□□□ -1.73
CCDC42Q96M95 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC42Q96M95 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC42Q96M95 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC42Q96M95 RNU11-4P-201ENST00000391149 133 ntBASIC4.23□□□□□ -1.73
CCDC42Q96M95 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC42Q96M95 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC42Q96M95 AC108032.1-201ENST00000416706 207 ntBASIC4.23□□□□□ -1.73
CCDC42Q96M95 RPL7P4-203ENST00000430239 730 ntBASIC4.23□□□□□ -1.73
CCDC42Q96M95 RPS17P13-201ENST00000448974 407 ntBASIC4.23□□□□□ -1.73
CCDC42Q96M95 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC42Q96M95 NDUFA12P1-201ENST00000455914 406 ntBASIC4.23□□□□□ -1.73
CCDC42Q96M95 STRADBP1-201ENST00000478954 1281 ntBASIC4.23□□□□□ -1.73
CCDC42Q96M95 TRBV8-1-201ENST00000481590 279 ntBASIC4.23□□□□□ -1.73
CCDC42Q96M95 RPS27AP13-201ENST00000498403 237 ntBASIC4.23□□□□□ -1.73
CCDC42Q96M95 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC42Q96M95 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.23□□□□□ -1.73
CCDC42Q96M95 AC020593.1-201ENST00000507399 299 ntBASIC4.23□□□□□ -1.73
CCDC42Q96M95 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC42Q96M95 IGKV2D-23-201ENST00000518179 286 ntBASIC4.23□□□□□ -1.73
CCDC42Q96M95 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC42Q96M95 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC42Q96M95 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC42Q96M95 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC42Q96M95 AC006116.5-201ENST00000591936 559 ntBASIC4.23□□□□□ -1.73
CCDC42Q96M95 BRDTP1-201ENST00000605735 677 ntBASIC4.23□□□□□ -1.73
CCDC42Q96M95 MIR6868-201ENST00000611215 58 ntBASIC4.23□□□□□ -1.73
CCDC42Q96M95 AC114781.5-201ENST00000615297 108 ntBASIC4.23□□□□□ -1.73
CCDC42Q96M95 AL121890.3-201ENST00000618494 516 ntBASIC4.23□□□□□ -1.73
CCDC42Q96M95 MIR8059-201ENST00000620427 81 ntBASIC4.23□□□□□ -1.73
CCDC42Q96M95 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.23□□□□□ -1.73
CCDC42Q96M95 MIR3653-201ENST00000625572 110 ntBASIC4.23□□□□□ -1.73
CCDC42Q96M95 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC42Q96M95 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC42Q96M95 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC42Q96M95 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC42Q96M95 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CCDC42Q96M95 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC42Q96M95 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC42Q96M95 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC42Q96M95 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
CCDC42Q96M95 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC42Q96M95 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC42Q96M95 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC42Q96M95 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CCDC42Q96M95 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC42Q96M95 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC42Q96M95 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC42Q96M95 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC42Q96M95 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC42Q96M95 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CCDC42Q96M95 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CCDC42Q96M95 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC42Q96M95 RPL37P18-201ENST00000411602 243 ntBASIC4.22□□□□□ -1.73
CCDC42Q96M95 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC42Q96M95 RPL23AP38-201ENST00000423801 469 ntBASIC4.22□□□□□ -1.73
CCDC42Q96M95 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC42Q96M95 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC42Q96M95 RANP8-201ENST00000444720 713 ntBASIC4.22□□□□□ -1.73
CCDC42Q96M95 AL035551.1-201ENST00000446931 348 ntBASIC4.22□□□□□ -1.73
CCDC42Q96M95 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC42Q96M95 MTCO3P20-201ENST00000454926 688 ntBASIC4.22□□□□□ -1.73
CCDC42Q96M95 AC091167.1-201ENST00000492017 396 ntBASIC4.22□□□□□ -1.73
CCDC42Q96M95 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
CCDC42Q96M95 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC42Q96M95 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC42Q96M95 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC42Q96M95 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CCDC42Q96M95 CYCSP29-201ENST00000533731 318 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms