Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.26□□□□□ -1.73
C9orf72Q96LT7 RPS6P4-201ENST00000494693 758 ntBASIC4.26□□□□□ -1.73
C9orf72Q96LT7 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.26□□□□□ -1.73
C9orf72Q96LT7 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.26□□□□□ -1.73
C9orf72Q96LT7 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.26□□□□□ -1.73
C9orf72Q96LT7 IGKV2-38-201ENST00000517443 247 ntBASIC4.26□□□□□ -1.73
C9orf72Q96LT7 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.26□□□□□ -1.73
C9orf72Q96LT7 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.26□□□□□ -1.73
C9orf72Q96LT7 AC090819.1-201ENST00000523800 1111 ntBASIC4.26□□□□□ -1.73
C9orf72Q96LT7 NPM1P35-201ENST00000533043 868 ntBASIC4.26□□□□□ -1.73
C9orf72Q96LT7 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.26□□□□□ -1.73
C9orf72Q96LT7 AC007390.2-201ENST00000606229 3803 ntBASIC4.26□□□□□ -1.73
C9orf72Q96LT7 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.26□□□□□ -1.73
C9orf72Q96LT7 AC026368.1-201ENST00000614934 690 ntBASIC4.26□□□□□ -1.73
C9orf72Q96LT7 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
C9orf72Q96LT7 RMST_5.1-201ENST00000618704 126 ntBASIC4.26□□□□□ -1.73
C9orf72Q96LT7 AL445567.2-201ENST00000618935 498 ntBASIC4.26□□□□□ -1.73
C9orf72Q96LT7 AC068831.8-201ENST00000620171 435 ntBASIC4.26□□□□□ -1.73
C9orf72Q96LT7 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
C9orf72Q96LT7 MIR4727-201ENST00000622232 55 ntBASIC4.26□□□□□ -1.73
C9orf72Q96LT7 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.26□□□□□ -1.73
C9orf72Q96LT7 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.26□□□□□ -1.73
C9orf72Q96LT7 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.26□□□□□ -1.73
C9orf72Q96LT7 MFSD8-220ENST00000641243 1422 ntBASIC4.26□□□□□ -1.73
C9orf72Q96LT7 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.26□□□□□ -1.73
C9orf72Q96LT7 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.26□□□□□ -1.73
C9orf72Q96LT7 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.26□□□□□ -1.73
C9orf72Q96LT7 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
C9orf72Q96LT7 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
C9orf72Q96LT7 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
C9orf72Q96LT7 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
C9orf72Q96LT7 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.25□□□□□ -1.73
C9orf72Q96LT7 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.25□□□□□ -1.73
C9orf72Q96LT7 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.25□□□□□ -1.73
C9orf72Q96LT7 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
C9orf72Q96LT7 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.25□□□□□ -1.73
C9orf72Q96LT7 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.25□□□□□ -1.73
C9orf72Q96LT7 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.25□□□□□ -1.73
C9orf72Q96LT7 RNA5SP366-201ENST00000365454 123 ntBASIC4.25□□□□□ -1.73
C9orf72Q96LT7 ST13P16-201ENST00000401760 781 ntBASIC4.25□□□□□ -1.73
C9orf72Q96LT7 AL034374.1-201ENST00000406329 351 ntBASIC4.25□□□□□ -1.73
C9orf72Q96LT7 RPL23AP26-201ENST00000412728 464 ntBASIC4.25□□□□□ -1.73
C9orf72Q96LT7 MFSD13B-201ENST00000420133 1290 ntBASIC4.25□□□□□ -1.73
C9orf72Q96LT7 MTND2P11-201ENST00000423638 648 ntBASIC4.25□□□□□ -1.73
C9orf72Q96LT7 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.25□□□□□ -1.73
C9orf72Q96LT7 MTCO1P54-201ENST00000430139 712 ntBASIC4.25□□□□□ -1.73
C9orf72Q96LT7 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.25□□□□□ -1.73
C9orf72Q96LT7 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.25□□□□□ -1.73
C9orf72Q96LT7 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.25□□□□□ -1.73
C9orf72Q96LT7 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.25□□□□□ -1.73
C9orf72Q96LT7 NUTF2P7-201ENST00000453086 375 ntBASIC4.25□□□□□ -1.73
C9orf72Q96LT7 RPL31P53-201ENST00000457065 348 ntBASIC4.25□□□□□ -1.73
C9orf72Q96LT7 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.25□□□□□ -1.73
C9orf72Q96LT7 UQCRHP4-201ENST00000471686 272 ntBASIC4.25□□□□□ -1.73
C9orf72Q96LT7 STRADBP1-201ENST00000478954 1281 ntBASIC4.25□□□□□ -1.73
C9orf72Q96LT7 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.25□□□□□ -1.73
C9orf72Q96LT7 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.25□□□□□ -1.73
C9orf72Q96LT7 AC091167.1-201ENST00000492017 396 ntBASIC4.25□□□□□ -1.73
C9orf72Q96LT7 HAUS1P1-201ENST00000505275 832 ntBASIC4.25□□□□□ -1.73
C9orf72Q96LT7 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.25□□□□□ -1.73
C9orf72Q96LT7 VTA1P2-201ENST00000520205 911 ntBASIC4.25□□□□□ -1.73
C9orf72Q96LT7 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.25□□□□□ -1.73
C9orf72Q96LT7 AC090281.1-201ENST00000523019 276 ntBASIC4.25□□□□□ -1.73
C9orf72Q96LT7 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.25□□□□□ -1.73
C9orf72Q96LT7 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
C9orf72Q96LT7 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.25□□□□□ -1.73
C9orf72Q96LT7 AC090515.3-201ENST00000560431 315 ntBASIC4.25□□□□□ -1.73
C9orf72Q96LT7 AP005901.4-201ENST00000577336 569 ntBASIC4.25□□□□□ -1.73
C9orf72Q96LT7 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.25□□□□□ -1.73
C9orf72Q96LT7 FAM60CP-201ENST00000591086 664 ntBASIC4.25□□□□□ -1.73
C9orf72Q96LT7 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.25□□□□□ -1.73
C9orf72Q96LT7 AC034236.3-201ENST00000605999 461 ntBASIC4.25□□□□□ -1.73
C9orf72Q96LT7 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
C9orf72Q96LT7 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
C9orf72Q96LT7 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.25□□□□□ -1.73
C9orf72Q96LT7 AL356121.2-201ENST00000624715 780 ntBASIC4.25□□□□□ -1.73
C9orf72Q96LT7 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.25□□□□□ -1.73
C9orf72Q96LT7 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.25□□□□□ -1.73
C9orf72Q96LT7 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
C9orf72Q96LT7 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
C9orf72Q96LT7 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
C9orf72Q96LT7 PHKBP1-201ENST00000450951 1951 ntBASIC4.24□□□□□ -1.73
C9orf72Q96LT7 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
C9orf72Q96LT7 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
C9orf72Q96LT7 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
C9orf72Q96LT7 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.24□□□□□ -1.73
C9orf72Q96LT7 AMZ2P2-201ENST00000406819 1057 ntBASIC4.24□□□□□ -1.73
C9orf72Q96LT7 RNA5SP36-201ENST00000410197 133 ntBASIC4.24□□□□□ -1.73
C9orf72Q96LT7 NRBF2P2-201ENST00000413087 861 ntBASIC4.24□□□□□ -1.73
C9orf72Q96LT7 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
C9orf72Q96LT7 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
C9orf72Q96LT7 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.24□□□□□ -1.73
C9orf72Q96LT7 CACYBPP1-201ENST00000438592 684 ntBASIC4.24□□□□□ -1.73
C9orf72Q96LT7 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
C9orf72Q96LT7 AL512326.1-201ENST00000443050 721 ntBASIC4.24□□□□□ -1.73
C9orf72Q96LT7 AC104306.1-201ENST00000449702 371 ntBASIC4.24□□□□□ -1.73
C9orf72Q96LT7 AL354710.1-201ENST00000453641 246 ntBASIC4.24□□□□□ -1.73
C9orf72Q96LT7 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.24□□□□□ -1.73
C9orf72Q96LT7 AL161747.1-201ENST00000480068 358 ntBASIC4.24□□□□□ -1.73
C9orf72Q96LT7 AC105137.1-201ENST00000484355 562 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms