Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 AC011447.7-201ENST00000624228 1590 ntBASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 OR1L1-202ENST00000373686 1083 ntBASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 SNORA51.12-201ENST00000384448 134 ntBASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 SNORA66-201ENST00000384792 133 ntBASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 AF186996.5-201ENST00000418098 904 ntBASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 KRR1P1-201ENST00000419430 803 ntBASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 AC004022.1-201ENST00000447766 1066 ntBASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 IGHV5-78-201ENST00000450948 295 ntBASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 AC002553.2-201ENST00000453217 340 ntBASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 RPL37P3-201ENST00000456825 293 ntBASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 AC008562.1-201ENST00000521763 330 ntBASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 AC139103.1-201ENST00000534696 1030 ntBASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 NMNAT1P1-201ENST00000554095 876 ntBASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 AC015688.2-201ENST00000584523 262 ntBASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 MTND3P19-201ENST00000603825 345 ntBASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 AL031320.1-201ENST00000604177 357 ntBASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 MAPK10-286ENST00000641208 8747 ntBASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CHMP4CQ96CF2 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 AC119744.1-201ENST00000454746 1715 ntBASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 RNA5SP191-201ENST00000362585 102 ntBASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 RNU6-413P-201ENST00000384115 107 ntBASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 Z97832.1-201ENST00000402490 328 ntBASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 FCF1P5-201ENST00000406490 482 ntBASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 RN7SKP16-201ENST00000410180 299 ntBASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 AC010099.3-201ENST00000423896 409 ntBASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 AL009174.1-201ENST00000426577 416 ntBASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 RPS29P9-201ENST00000440360 171 ntBASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 TXNP5-201ENST00000441043 315 ntBASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 BTF3P6-201ENST00000448054 499 ntBASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 RN7SL517P-201ENST00000462240 305 ntBASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 RN7SL244P-201ENST00000493405 297 ntBASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 RNA5SP43-201ENST00000516559 110 ntBASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 RNU6-347P-201ENST00000516658 105 ntBASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 DUXAP5-201ENST00000529668 529 ntBASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 MTND4LP24-201ENST00000572277 291 ntBASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 BPTFP1-201ENST00000579209 492 ntBASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 AC061975.8-201ENST00000587058 721 ntBASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 AC115085.1-201ENST00000588924 229 ntBASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 PSMA6P4-201ENST00000603247 718 ntBASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 AC007349.4-201ENST00000608114 532 ntBASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 AC116651.1-201ENST00000609724 556 ntBASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 AC024257.5-201ENST00000612739 531 ntBASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 AC243654.2-201ENST00000612843 443 ntBASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 INTS6P1-201ENST00000504674 2530 ntBASIC5.92□□□□□ -1.46
CHMP4CQ96CF2 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CHMP4CQ96CF2 NACA3P-201ENST00000359690 648 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms