Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.99□□□□□ -1.61
HMGB4Q8WW32 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HMGB4Q8WW32 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
HMGB4Q8WW32 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
HMGB4Q8WW32 RNU6-619P-201ENST00000365146 108 ntBASIC4.99□□□□□ -1.61
HMGB4Q8WW32 SNORD116.1-201ENST00000365628 92 ntBASIC4.99□□□□□ -1.61
HMGB4Q8WW32 SNORA51.12-201ENST00000384448 134 ntBASIC4.99□□□□□ -1.61
HMGB4Q8WW32 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.99□□□□□ -1.61
HMGB4Q8WW32 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.99□□□□□ -1.61
HMGB4Q8WW32 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HMGB4Q8WW32 OR51A3P-201ENST00000413596 924 ntBASIC4.99□□□□□ -1.61
HMGB4Q8WW32 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.99□□□□□ -1.61
HMGB4Q8WW32 P2RY10P2-201ENST00000416730 913 ntBASIC4.99□□□□□ -1.61
HMGB4Q8WW32 AC234782.4-201ENST00000417646 1048 ntBASIC4.99□□□□□ -1.61
HMGB4Q8WW32 AC010099.3-201ENST00000423896 409 ntBASIC4.99□□□□□ -1.61
HMGB4Q8WW32 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.99□□□□□ -1.61
HMGB4Q8WW32 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.99□□□□□ -1.61
HMGB4Q8WW32 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.99□□□□□ -1.61
HMGB4Q8WW32 RPS29P9-201ENST00000440360 171 ntBASIC4.99□□□□□ -1.61
HMGB4Q8WW32 AURKAPS2-201ENST00000454983 333 ntBASIC4.99□□□□□ -1.61
HMGB4Q8WW32 USP9YP25-201ENST00000457708 443 ntBASIC4.99□□□□□ -1.61
HMGB4Q8WW32 snoU13.1-201ENST00000459157 104 ntBASIC4.99□□□□□ -1.61
HMGB4Q8WW32 BOLA3P3-201ENST00000505182 232 ntBASIC4.99□□□□□ -1.61
HMGB4Q8WW32 AC111000.3-201ENST00000508057 576 ntBASIC4.99□□□□□ -1.61
HMGB4Q8WW32 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.99□□□□□ -1.61
HMGB4Q8WW32 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.99□□□□□ -1.61
HMGB4Q8WW32 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.99□□□□□ -1.61
HMGB4Q8WW32 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.99□□□□□ -1.61
HMGB4Q8WW32 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.99□□□□□ -1.61
HMGB4Q8WW32 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.99□□□□□ -1.61
HMGB4Q8WW32 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.99□□□□□ -1.61
HMGB4Q8WW32 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.99□□□□□ -1.61
HMGB4Q8WW32 RPL26P30-202ENST00000602923 645 ntBASIC4.99□□□□□ -1.61
HMGB4Q8WW32 AC010632.3-201ENST00000611377 369 ntBASIC4.99□□□□□ -1.61
HMGB4Q8WW32 AC231759.1-201ENST00000616455 597 ntBASIC4.99□□□□□ -1.61
HMGB4Q8WW32 AP000484.1-201ENST00000620067 1252 ntBASIC4.99□□□□□ -1.61
HMGB4Q8WW32 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.99□□□□□ -1.61
HMGB4Q8WW32 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.99□□□□□ -1.61
HMGB4Q8WW32 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.99□□□□□ -1.61
HMGB4Q8WW32 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HMGB4Q8WW32 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.99□□□□□ -1.61
HMGB4Q8WW32 Z98755.1-201ENST00000407015 1384 ntBASIC4.99□□□□□ -1.61
HMGB4Q8WW32 TRIM51GP-201ENST00000534741 1350 ntBASIC4.99□□□□□ -1.61
HMGB4Q8WW32 AC027228.2-201ENST00000567141 2154 ntBASIC4.99□□□□□ -1.61
HMGB4Q8WW32 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
HMGB4Q8WW32 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HMGB4Q8WW32 ZNF652P1-201ENST00000442420 1309 ntBASIC4.98□□□□□ -1.61
HMGB4Q8WW32 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 AL512646.1-201ENST00000269395 1077 ntBASIC4.98□□□□□ -1.61
HMGB4Q8WW32 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 AC093719.1-202ENST00000392735 373 ntBASIC4.98□□□□□ -1.61
HMGB4Q8WW32 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 SFR1P1-201ENST00000403720 688 ntBASIC4.98□□□□□ -1.61
HMGB4Q8WW32 FCF1P5-201ENST00000406490 482 ntBASIC4.98□□□□□ -1.61
HMGB4Q8WW32 GSTM3P2-201ENST00000412746 530 ntBASIC4.98□□□□□ -1.61
HMGB4Q8WW32 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.98□□□□□ -1.61
HMGB4Q8WW32 CNOT7P1-201ENST00000429006 852 ntBASIC4.98□□□□□ -1.61
HMGB4Q8WW32 AC009238.2-201ENST00000431026 355 ntBASIC4.98□□□□□ -1.61
HMGB4Q8WW32 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 GTF2IP7-202ENST00000436677 309 ntBASIC4.98□□□□□ -1.61
HMGB4Q8WW32 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 AC007327.1-201ENST00000447461 264 ntBASIC4.98□□□□□ -1.61
HMGB4Q8WW32 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 RPL12P20-201ENST00000475538 479 ntBASIC4.98□□□□□ -1.61
HMGB4Q8WW32 RPS27P23-201ENST00000487608 251 ntBASIC4.98□□□□□ -1.61
HMGB4Q8WW32 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 AC021193.1-201ENST00000511607 420 ntBASIC4.98□□□□□ -1.61
HMGB4Q8WW32 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 OR4A2P-201ENST00000527276 913 ntBASIC4.98□□□□□ -1.61
HMGB4Q8WW32 UBTFL10-201ENST00000528532 562 ntBASIC4.98□□□□□ -1.61
HMGB4Q8WW32 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.98□□□□□ -1.61
HMGB4Q8WW32 VN1R78P-201ENST00000597393 564 ntBASIC4.98□□□□□ -1.61
HMGB4Q8WW32 AP004247.3-201ENST00000608682 624 ntBASIC4.98□□□□□ -1.61
HMGB4Q8WW32 AC019193.2-201ENST00000610012 634 ntBASIC4.98□□□□□ -1.61
HMGB4Q8WW32 AL162574.1-201ENST00000615702 950 ntBASIC4.98□□□□□ -1.61
HMGB4Q8WW32 AC091932.2-201ENST00000623014 291 ntBASIC4.98□□□□□ -1.61
HMGB4Q8WW32 AL157770.1-201ENST00000623049 439 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms