Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HERC6Q8IVU3 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HERC6Q8IVU3 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HERC6Q8IVU3 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HERC6Q8IVU3 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HERC6Q8IVU3 AC009951.1-201ENST00000623674 2614 ntBASIC5.22□□□□□ -1.57
HERC6Q8IVU3 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.22□□□□□ -1.57
HERC6Q8IVU3 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HERC6Q8IVU3 RNA5SP509-201ENST00000364577 119 ntBASIC5.22□□□□□ -1.57
HERC6Q8IVU3 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HERC6Q8IVU3 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HERC6Q8IVU3 LRRC37BP1-201ENST00000398851 714 ntBASIC5.22□□□□□ -1.57
HERC6Q8IVU3 RPL21P67-201ENST00000402896 478 ntBASIC5.22□□□□□ -1.57
HERC6Q8IVU3 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.22□□□□□ -1.57
HERC6Q8IVU3 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.22□□□□□ -1.57
HERC6Q8IVU3 UQCRBP1-201ENST00000421129 336 ntBASIC5.22□□□□□ -1.57
HERC6Q8IVU3 AC099336.2-201ENST00000422457 254 ntBASIC5.22□□□□□ -1.57
HERC6Q8IVU3 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC5.22□□□□□ -1.57
HERC6Q8IVU3 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.22□□□□□ -1.57
HERC6Q8IVU3 MTCO1P53-201ENST00000441633 699 ntBASIC5.22□□□□□ -1.57
HERC6Q8IVU3 AC000111.2-201ENST00000448200 210 ntBASIC5.22□□□□□ -1.57
HERC6Q8IVU3 DNAJC19P8-201ENST00000452887 259 ntBASIC5.22□□□□□ -1.57
HERC6Q8IVU3 AC099560.2-201ENST00000457554 255 ntBASIC5.22□□□□□ -1.57
HERC6Q8IVU3 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.22□□□□□ -1.57
HERC6Q8IVU3 AC073358.1-201ENST00000505671 684 ntBASIC5.22□□□□□ -1.57
HERC6Q8IVU3 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.22□□□□□ -1.57
HERC6Q8IVU3 AC008562.1-201ENST00000521763 330 ntBASIC5.22□□□□□ -1.57
HERC6Q8IVU3 NDUFS5P6-201ENST00000529136 295 ntBASIC5.22□□□□□ -1.57
HERC6Q8IVU3 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC5.22□□□□□ -1.57
HERC6Q8IVU3 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.22□□□□□ -1.57
HERC6Q8IVU3 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.22□□□□□ -1.57
HERC6Q8IVU3 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.22□□□□□ -1.57
HERC6Q8IVU3 AC007224.1-201ENST00000564410 144 ntBASIC5.22□□□□□ -1.57
HERC6Q8IVU3 AC069061.3-201ENST00000582254 823 ntBASIC5.22□□□□□ -1.57
HERC6Q8IVU3 AC069366.1-201ENST00000583159 838 ntBASIC5.22□□□□□ -1.57
HERC6Q8IVU3 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.22□□□□□ -1.57
HERC6Q8IVU3 AC073091.2-201ENST00000603205 907 ntBASIC5.22□□□□□ -1.57
HERC6Q8IVU3 AC112220.2-201ENST00000605513 533 ntBASIC5.22□□□□□ -1.57
HERC6Q8IVU3 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.22□□□□□ -1.57
HERC6Q8IVU3 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.22□□□□□ -1.57
HERC6Q8IVU3 AL050303.3-201ENST00000613704 284 ntBASIC5.22□□□□□ -1.57
HERC6Q8IVU3 AL353726.1-201ENST00000614041 1000 ntBASIC5.22□□□□□ -1.57
HERC6Q8IVU3 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HERC6Q8IVU3 AC004232.3-201ENST00000622977 525 ntBASIC5.22□□□□□ -1.57
HERC6Q8IVU3 AC109454.4-201ENST00000623411 649 ntBASIC5.22□□□□□ -1.57
HERC6Q8IVU3 AC092608.3-201ENST00000625017 386 ntBASIC5.22□□□□□ -1.57
HERC6Q8IVU3 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.22□□□□□ -1.57
HERC6Q8IVU3 STX3-208ENST00000641815 3236 ntBASIC5.22□□□□□ -1.57
HERC6Q8IVU3 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
HERC6Q8IVU3 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.22□□□□□ -1.57
HERC6Q8IVU3 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HERC6Q8IVU3 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
HERC6Q8IVU3 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HERC6Q8IVU3 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.22□□□□□ -1.57
HERC6Q8IVU3 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HERC6Q8IVU3 AC104446.1-201ENST00000613728 1321 ntBASIC5.22□□□□□ -1.57
HERC6Q8IVU3 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.21□□□□□ -1.57
HERC6Q8IVU3 AC025574.1-201ENST00000554784 1653 ntBASIC5.21□□□□□ -1.57
HERC6Q8IVU3 AC107027.3-201ENST00000565095 3473 ntBASIC5.21□□□□□ -1.57
HERC6Q8IVU3 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
HERC6Q8IVU3 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
HERC6Q8IVU3 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.21□□□□□ -1.57
HERC6Q8IVU3 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HERC6Q8IVU3 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
HERC6Q8IVU3 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HERC6Q8IVU3 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.21□□□□□ -1.58
HERC6Q8IVU3 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.21□□□□□ -1.58
HERC6Q8IVU3 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.21□□□□□ -1.58
HERC6Q8IVU3 RNU6-178P-201ENST00000384631 104 ntBASIC5.21□□□□□ -1.58
HERC6Q8IVU3 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.21□□□□□ -1.58
HERC6Q8IVU3 MTATP6P31-201ENST00000406985 692 ntBASIC5.21□□□□□ -1.58
HERC6Q8IVU3 RNA5SP345-201ENST00000410646 108 ntBASIC5.21□□□□□ -1.58
HERC6Q8IVU3 RPL12P9-201ENST00000412942 488 ntBASIC5.21□□□□□ -1.58
HERC6Q8IVU3 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.21□□□□□ -1.58
HERC6Q8IVU3 MTND4P3-201ENST00000417829 541 ntBASIC5.21□□□□□ -1.58
HERC6Q8IVU3 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.21□□□□□ -1.58
HERC6Q8IVU3 DYNLL1P7-201ENST00000429273 258 ntBASIC5.21□□□□□ -1.58
HERC6Q8IVU3 MTCYBP15-201ENST00000433123 1127 ntBASIC5.21□□□□□ -1.58
HERC6Q8IVU3 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.21□□□□□ -1.58
HERC6Q8IVU3 AL929288.2-201ENST00000446368 407 ntBASIC5.21□□□□□ -1.58
HERC6Q8IVU3 AC005002.1-201ENST00000447458 540 ntBASIC5.21□□□□□ -1.58
HERC6Q8IVU3 AL031313.1-201ENST00000448435 256 ntBASIC5.21□□□□□ -1.58
HERC6Q8IVU3 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.21□□□□□ -1.58
HERC6Q8IVU3 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.21□□□□□ -1.58
HERC6Q8IVU3 BX248409.1-201ENST00000455497 255 ntBASIC5.21□□□□□ -1.58
HERC6Q8IVU3 AC005412.2-201ENST00000492004 341 ntBASIC5.21□□□□□ -1.58
HERC6Q8IVU3 AC098799.3-201ENST00000506095 438 ntBASIC5.21□□□□□ -1.58
HERC6Q8IVU3 SNORA19.3-201ENST00000516165 130 ntBASIC5.21□□□□□ -1.58
HERC6Q8IVU3 AC091163.3-201ENST00000518269 1144 ntBASIC5.21□□□□□ -1.58
HERC6Q8IVU3 HMGB1P23-201ENST00000518743 568 ntBASIC5.21□□□□□ -1.58
HERC6Q8IVU3 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.21□□□□□ -1.58
HERC6Q8IVU3 AC087897.1-201ENST00000550134 156 ntBASIC5.21□□□□□ -1.58
HERC6Q8IVU3 AC084783.1-201ENST00000565846 910 ntBASIC5.21□□□□□ -1.58
HERC6Q8IVU3 MTND4LP24-201ENST00000572277 291 ntBASIC5.21□□□□□ -1.58
HERC6Q8IVU3 MIR4472-2-201ENST00000582069 67 ntBASIC5.21□□□□□ -1.58
HERC6Q8IVU3 AP005262.1-201ENST00000582646 997 ntBASIC5.21□□□□□ -1.58
HERC6Q8IVU3 MIR4760-201ENST00000585040 80 ntBASIC5.21□□□□□ -1.58
HERC6Q8IVU3 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.21□□□□□ -1.58
HERC6Q8IVU3 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.21□□□□□ -1.58
HERC6Q8IVU3 NTAN1P1-201ENST00000603150 646 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms