Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 RN7SKP237-201ENST00000364663 301 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 RNU1-39P-201ENST00000383897 165 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 RNU6-332P-201ENST00000391193 108 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 AL121972.1-201ENST00000402023 252 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 Z97832.1-201ENST00000402490 328 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 OR2W4P-201ENST00000406496 926 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 RN7SKP151-201ENST00000410230 316 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 RNU6-195P-201ENST00000411352 109 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 RPL31P35-201ENST00000431058 377 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 HMGB3P9-201ENST00000441799 583 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 AC079922.1-201ENST00000443291 359 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 AL136380.1-201ENST00000447970 162 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 AC002075.1-201ENST00000457396 676 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 RNU6-420P-201ENST00000458780 107 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 AC063943.1-201ENST00000465434 453 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 AC083798.1-201ENST00000472671 131 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 AC128716.1-201ENST00000475129 166 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 NIFKP7-201ENST00000503365 834 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 AC008945.1-201ENST00000505144 499 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 AC112484.3-201ENST00000505910 329 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 RNA5SP441-201ENST00000516809 88 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 RNU6-445P-201ENST00000516949 107 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 IGKV2-36-201ENST00000519999 223 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 AP003080.1-202ENST00000526526 915 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 PMS2P3-207ENST00000529061 717 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 AC090651.1-201ENST00000567865 634 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 AL078601.3-201ENST00000573303 535 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 AC079315.1-201ENST00000602952 623 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 YWHAQP7-201ENST00000603536 658 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 AP001823.1-201ENST00000604056 1003 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 AC002550.2-201ENST00000621246 394 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 AC009268.2-201ENST00000621925 457 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 CKAP2P1-201ENST00000555477 2049 ntBASIC5.86□□□□□ -1.47
UBE3DQ7Z6J8 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 AL121768.1-201ENST00000613917 2544 ntBASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 RNA5SP279-201ENST00000365513 117 ntBASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 RNU6-729P-201ENST00000384399 107 ntBASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 AL589872.1-201ENST00000426602 288 ntBASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 AL365400.1-201ENST00000431854 640 ntBASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 RPEP2-201ENST00000432149 701 ntBASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 AC023347.2-201ENST00000433994 462 ntBASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 TAAR7P-201ENST00000436141 242 ntBASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 RPL7P54-201ENST00000438336 674 ntBASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 MTCYBP6-201ENST00000441810 138 ntBASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 BTF3P5-201ENST00000457252 467 ntBASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 RN7SL362P-201ENST00000494228 267 ntBASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 AC090958.1-201ENST00000511122 351 ntBASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.85□□□□□ -1.47
UBE3DQ7Z6J8 SNORA19.2-201ENST00000516013 114 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 175.1 ms