Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 LINC00557-201ENST00000563184 1279 ntBASIC4.43□□□□□ -1.7
RFWD3Q6PCD5 AC040174.2-201ENST00000602701 465 ntBASIC4.43□□□□□ -1.7
RFWD3Q6PCD5 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.43□□□□□ -1.7
RFWD3Q6PCD5 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RFWD3Q6PCD5 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.43□□□□□ -1.7
RFWD3Q6PCD5 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RFWD3Q6PCD5 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 LARP1BP1-201ENST00000506036 1359 ntBASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 OR10J6P-201ENST00000289731 930 ntBASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 RNU1-14P-201ENST00000362759 152 ntBASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 SNORD66.1-201ENST00000391230 76 ntBASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 CCNB2P1-201ENST00000399411 1150 ntBASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 RNU2-72P-201ENST00000411175 163 ntBASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 CEACAMP1-201ENST00000434624 1035 ntBASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 EIF2S2P4-201ENST00000461070 984 ntBASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 AC104629.2-201ENST00000468627 598 ntBASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 AC025445.1-201ENST00000502728 300 ntBASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 PPM1AP1-201ENST00000502740 1135 ntBASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 AC139783.2-201ENST00000504847 1145 ntBASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 HSPD1P11-201ENST00000508643 1702 ntBASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 AC006499.6-201ENST00000511169 607 ntBASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 AC090819.1-201ENST00000523800 1111 ntBASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 AC025884.1-201ENST00000556034 378 ntBASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 MTND2P13-201ENST00000577438 1039 ntBASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 MIMT1-201ENST00000597105 1050 ntBASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 AC092474.3-201ENST00000603022 568 ntBASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 AP000720.1-201ENST00000625091 483 ntBASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 AC008013.2-202ENST00000637965 364 ntBASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 AC011266.1-201ENST00000624119 3569 ntBASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RFWD3Q6PCD5 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 ZNF962P-201ENST00000443465 3140 ntBASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 RNU1-15P-201ENST00000353977 144 ntBASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 RNU6-1251P-201ENST00000364502 107 ntBASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 RNA5SP513-201ENST00000364648 118 ntBASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 UBE2V1P15-201ENST00000407776 448 ntBASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 AC073335.1-201ENST00000427776 363 ntBASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 AC004975.1-201ENST00000428733 208 ntBASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 MTND4LP7-201ENST00000431728 294 ntBASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 AL132765.1-201ENST00000434165 553 ntBASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 AL353597.2-202ENST00000434901 373 ntBASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 EEF1A1P1-201ENST00000447052 739 ntBASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 NUTF2P7-201ENST00000453086 375 ntBASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 AL049829.1-201ENST00000465411 156 ntBASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 RWDD4P1-201ENST00000488019 565 ntBASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 SETP12-201ENST00000514068 805 ntBASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 HNRNPKP5-201ENST00000515300 253 ntBASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 AL161729.3-201ENST00000603533 673 ntBASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 AC090948.2-201ENST00000607363 564 ntBASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 RMST_5.1-201ENST00000618704 126 ntBASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 AC015722.2-201ENST00000622210 551 ntBASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 AL356490.1-201ENST00000623079 479 ntBASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 AC016717.3-201ENST00000624730 554 ntBASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RFWD3Q6PCD5 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms