Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 U3.28-201ENST00000391249 210 ntBASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 DBIP1-201ENST00000401435 260 ntBASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 EI24P4-201ENST00000423683 1078 ntBASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 VDAC1P6-201ENST00000430062 855 ntBASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 USP9YP14-201ENST00000430663 563 ntBASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 MTND1P34-201ENST00000438556 671 ntBASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 CBX1P4-201ENST00000439415 457 ntBASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 YWHAQP9-201ENST00000445891 512 ntBASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 MTND1P29-201ENST00000448112 647 ntBASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 NDUFA12P1-201ENST00000455914 406 ntBASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 SNORD125-201ENST00000459538 96 ntBASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 RN7SL244P-201ENST00000493405 297 ntBASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 AC021193.1-201ENST00000511607 420 ntBASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 BTF3P13-201ENST00000513224 490 ntBASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 SEPT10P1-201ENST00000517342 1162 ntBASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 OR5AN2P-201ENST00000534535 896 ntBASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 MIR4737-201ENST00000583979 81 ntBASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 AC068790.7-201ENST00000602347 528 ntBASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 AL109653.1-201ENST00000603091 248 ntBASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 Z99497.2-201ENST00000603634 310 ntBASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 AC021749.1-201ENST00000604322 607 ntBASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 AC107075.1-201ENST00000613695 314 ntBASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 AC105227.2-201ENST00000615075 605 ntBASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 AF001550.2-201ENST00000636643 217 ntBASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 AC087821.2-201ENST00000637086 450 ntBASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 BTBD10P1-201ENST00000549824 1352 ntBASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.37□□□□□ -1.55
SLC44A4Q53GD3 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 ABCC13-202ENST00000463099 3842 ntBASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 AC093719.1-202ENST00000392735 373 ntBASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 AL356967.1-201ENST00000406305 431 ntBASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 COX7BP2-201ENST00000437976 242 ntBASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 UBE2V1P5-201ENST00000440070 405 ntBASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 KNOP1P3-201ENST00000446933 426 ntBASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 AC005229.2-201ENST00000456995 399 ntBASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 RPL23AP12-201ENST00000467573 473 ntBASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 AC140172.1-201ENST00000502928 141 ntBASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 AC098799.3-201ENST00000506095 438 ntBASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 IGBP1P5-201ENST00000507524 1000 ntBASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 Y_RNA.655-201ENST00000515919 96 ntBASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 AC010306.1-201ENST00000523223 1117 ntBASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 AC087373.1-201ENST00000524920 491 ntBASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 AP005136.1-201ENST00000579765 429 ntBASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 VN1R88P-201ENST00000596787 292 ntBASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 AC011453.2-201ENST00000603737 729 ntBASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 AC090425.2-201ENST00000608818 501 ntBASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 AC009318.3-201ENST00000616916 503 ntBASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 AC012414.7-202ENST00000622705 1090 ntBASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 AL157770.1-201ENST00000623049 439 ntBASIC5.36□□□□□ -1.55
SLC44A4Q53GD3 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms