Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.89□□□□□ -1.79
RFX4Q33E94 AC021483.2-201ENST00000567415 758 ntBASIC3.89□□□□□ -1.79
RFX4Q33E94 AC007599.1-201ENST00000568688 1174 ntBASIC3.89□□□□□ -1.79
RFX4Q33E94 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.89□□□□□ -1.79
RFX4Q33E94 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.89□□□□□ -1.79
RFX4Q33E94 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.89□□□□□ -1.79
RFX4Q33E94 AC025175.1-201ENST00000606482 759 ntBASIC3.89□□□□□ -1.79
RFX4Q33E94 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.89□□□□□ -1.79
RFX4Q33E94 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.89□□□□□ -1.79
RFX4Q33E94 AC020763.5-201ENST00000623298 430 ntBASIC3.89□□□□□ -1.79
RFX4Q33E94 AC104820.1-201ENST00000624183 307 ntBASIC3.89□□□□□ -1.79
RFX4Q33E94 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.89□□□□□ -1.79
RFX4Q33E94 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.89□□□□□ -1.79
RFX4Q33E94 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
RFX4Q33E94 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RFX4Q33E94 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
RFX4Q33E94 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.88□□□□□ -1.79
RFX4Q33E94 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.88□□□□□ -1.79
RFX4Q33E94 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.88□□□□□ -1.79
RFX4Q33E94 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RFX4Q33E94 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RFX4Q33E94 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RFX4Q33E94 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
RFX4Q33E94 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.88□□□□□ -1.79
RFX4Q33E94 IPO8P1-201ENST00000455509 3109 ntBASIC3.88□□□□□ -1.79
RFX4Q33E94 AC008033.1-201ENST00000216407 1162 ntBASIC3.88□□□□□ -1.79
RFX4Q33E94 RN7SKP103-201ENST00000363848 320 ntBASIC3.88□□□□□ -1.79
RFX4Q33E94 SNORA58B-201ENST00000364259 136 ntBASIC3.88□□□□□ -1.79
RFX4Q33E94 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
RFX4Q33E94 AMZ2P2-201ENST00000406819 1057 ntBASIC3.88□□□□□ -1.79
RFX4Q33E94 AL512504.1-201ENST00000415494 778 ntBASIC3.88□□□□□ -1.79
RFX4Q33E94 AC006065.1-201ENST00000422539 802 ntBASIC3.88□□□□□ -1.79
RFX4Q33E94 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.88□□□□□ -1.79
RFX4Q33E94 RPL12P28-201ENST00000430852 489 ntBASIC3.88□□□□□ -1.79
RFX4Q33E94 ARL5AP3-201ENST00000439327 386 ntBASIC3.88□□□□□ -1.79
RFX4Q33E94 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.88□□□□□ -1.79
RFX4Q33E94 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.88□□□□□ -1.79
RFX4Q33E94 MTND3P4-201ENST00000453537 303 ntBASIC3.88□□□□□ -1.79
RFX4Q33E94 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.88□□□□□ -1.79
RFX4Q33E94 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.88□□□□□ -1.79
RFX4Q33E94 RNU6-491P-201ENST00000516099 110 ntBASIC3.88□□□□□ -1.79
RFX4Q33E94 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.88□□□□□ -1.79
RFX4Q33E94 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.88□□□□□ -1.79
RFX4Q33E94 OR7E10P-201ENST00000526420 991 ntBASIC3.88□□□□□ -1.79
RFX4Q33E94 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.88□□□□□ -1.79
RFX4Q33E94 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.88□□□□□ -1.79
RFX4Q33E94 AC084783.1-201ENST00000565846 910 ntBASIC3.88□□□□□ -1.79
RFX4Q33E94 AC141257.3-201ENST00000572906 215 ntBASIC3.88□□□□□ -1.79
RFX4Q33E94 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.88□□□□□ -1.79
RFX4Q33E94 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.88□□□□□ -1.79
RFX4Q33E94 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.88□□□□□ -1.79
RFX4Q33E94 BMS1P7-201ENST00000602440 1052 ntBASIC3.88□□□□□ -1.79
RFX4Q33E94 AC008782.1-201ENST00000603386 430 ntBASIC3.88□□□□□ -1.79
RFX4Q33E94 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.88□□□□□ -1.79
RFX4Q33E94 AL035461.2-201ENST00000619201 524 ntBASIC3.88□□□□□ -1.79
RFX4Q33E94 AP001784.1-201ENST00000624107 428 ntBASIC3.88□□□□□ -1.79
RFX4Q33E94 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC3.88□□□□□ -1.79
RFX4Q33E94 AC119674.1-220ENST00000641502 1048 ntBASIC3.88□□□□□ -1.79
RFX4Q33E94 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RFX4Q33E94 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RFX4Q33E94 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RFX4Q33E94 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RFX4Q33E94 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.87□□□□□ -1.79
RFX4Q33E94 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RFX4Q33E94 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RFX4Q33E94 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.87□□□□□ -1.79
RFX4Q33E94 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RFX4Q33E94 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RFX4Q33E94 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
RFX4Q33E94 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RFX4Q33E94 OR4K15-201ENST00000305051 1216 ntBASIC3.87□□□□□ -1.79
RFX4Q33E94 OR11H4-201ENST00000315409 1082 ntBASIC3.87□□□□□ -1.79
RFX4Q33E94 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RFX4Q33E94 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
RFX4Q33E94 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
RFX4Q33E94 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RFX4Q33E94 SNORD65-201ENST00000391079 73 ntBASIC3.87□□□□□ -1.79
RFX4Q33E94 AL133270.1-201ENST00000402635 279 ntBASIC3.87□□□□□ -1.79
RFX4Q33E94 SNORA11F-201ENST00000408237 128 ntBASIC3.87□□□□□ -1.79
RFX4Q33E94 AMD1P2-201ENST00000412936 992 ntBASIC3.87□□□□□ -1.79
RFX4Q33E94 AL450992.3-201ENST00000413192 568 ntBASIC3.87□□□□□ -1.79
RFX4Q33E94 AL138785.1-201ENST00000425821 331 ntBASIC3.87□□□□□ -1.79
RFX4Q33E94 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.87□□□□□ -1.79
RFX4Q33E94 AC093716.1-201ENST00000435923 377 ntBASIC3.87□□□□□ -1.79
RFX4Q33E94 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.87□□□□□ -1.79
RFX4Q33E94 HMGB3P21-201ENST00000452483 547 ntBASIC3.87□□□□□ -1.79
RFX4Q33E94 RPL23AP81-201ENST00000455252 467 ntBASIC3.87□□□□□ -1.79
RFX4Q33E94 RPL36AP13-201ENST00000457490 317 ntBASIC3.87□□□□□ -1.79
RFX4Q33E94 RPL35AP28-201ENST00000459730 331 ntBASIC3.87□□□□□ -1.79
RFX4Q33E94 HAUS1P1-201ENST00000505275 832 ntBASIC3.87□□□□□ -1.79
RFX4Q33E94 PCNAP1-201ENST00000505363 709 ntBASIC3.87□□□□□ -1.79
RFX4Q33E94 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.87□□□□□ -1.79
RFX4Q33E94 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.87□□□□□ -1.79
RFX4Q33E94 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.87□□□□□ -1.79
RFX4Q33E94 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.87□□□□□ -1.79
RFX4Q33E94 RFPL1S-203ENST00000539579 330 ntBASIC3.87□□□□□ -1.79
RFX4Q33E94 GNRHR2P1-201ENST00000555315 631 ntBASIC3.87□□□□□ -1.79
RFX4Q33E94 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.87□□□□□ -1.79
RFX4Q33E94 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.87□□□□□ -1.79
RFX4Q33E94 AC015911.5-201ENST00000587076 451 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms