Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HMGN3Q15651 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.37□□□□□ -1.87
HMGN3Q15651 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HMGN3Q15651 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HMGN3Q15651 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HMGN3Q15651 AC100871.1-201ENST00000507871 1456 ntBASIC3.36□□□□□ -1.87
HMGN3Q15651 AC007685.1-201ENST00000329806 452 ntBASIC3.36□□□□□ -1.87
HMGN3Q15651 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
HMGN3Q15651 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HMGN3Q15651 RN7SKP285-201ENST00000410137 318 ntBASIC3.36□□□□□ -1.87
HMGN3Q15651 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.36□□□□□ -1.87
HMGN3Q15651 CHIAP3-201ENST00000423668 1133 ntBASIC3.36□□□□□ -1.87
HMGN3Q15651 AC023141.6-201ENST00000429418 337 ntBASIC3.36□□□□□ -1.87
HMGN3Q15651 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.36□□□□□ -1.87
HMGN3Q15651 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.36□□□□□ -1.87
HMGN3Q15651 AC083863.1-201ENST00000438811 231 ntBASIC3.36□□□□□ -1.87
HMGN3Q15651 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HMGN3Q15651 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.36□□□□□ -1.87
HMGN3Q15651 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.36□□□□□ -1.87
HMGN3Q15651 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.36□□□□□ -1.87
HMGN3Q15651 AC004801.2-202ENST00000463559 283 ntBASIC3.36□□□□□ -1.87
HMGN3Q15651 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HMGN3Q15651 RN7SL604P-201ENST00000492589 296 ntBASIC3.36□□□□□ -1.87
HMGN3Q15651 AC108475.1-201ENST00000507880 950 ntBASIC3.36□□□□□ -1.87
HMGN3Q15651 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.36□□□□□ -1.87
HMGN3Q15651 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.36□□□□□ -1.87
HMGN3Q15651 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
HMGN3Q15651 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.36□□□□□ -1.87
HMGN3Q15651 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.36□□□□□ -1.87
HMGN3Q15651 AC025627.2-201ENST00000576220 160 ntBASIC3.36□□□□□ -1.87
HMGN3Q15651 AL121890.3-201ENST00000618494 516 ntBASIC3.36□□□□□ -1.87
HMGN3Q15651 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.36□□□□□ -1.87
HMGN3Q15651 PWAR6-201ENST00000552334 4618 ntBASIC3.36□□□□□ -1.87
HMGN3Q15651 Z73965.1-201ENST00000623412 2297 ntBASIC3.36□□□□□ -1.87
HMGN3Q15651 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.36□□□□□ -1.87
HMGN3Q15651 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
HMGN3Q15651 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
HMGN3Q15651 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HMGN3Q15651 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.35□□□□□ -1.87
HMGN3Q15651 AC007529.1-201ENST00000418574 2178 ntBASIC3.35□□□□□ -1.87
HMGN3Q15651 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HMGN3Q15651 MIR383-201ENST00000362257 73 ntBASIC3.35□□□□□ -1.87
HMGN3Q15651 RNU4-39P-201ENST00000362455 127 ntBASIC3.35□□□□□ -1.87
HMGN3Q15651 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HMGN3Q15651 HMGB3P5-201ENST00000428894 612 ntBASIC3.35□□□□□ -1.87
HMGN3Q15651 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.35□□□□□ -1.87
HMGN3Q15651 RPL5P32-201ENST00000454085 879 ntBASIC3.35□□□□□ -1.87
HMGN3Q15651 RPL38P1-201ENST00000460914 211 ntBASIC3.35□□□□□ -1.87
HMGN3Q15651 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.35□□□□□ -1.87
HMGN3Q15651 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.35□□□□□ -1.87
HMGN3Q15651 IGBP1P5-201ENST00000507524 1000 ntBASIC3.35□□□□□ -1.87
HMGN3Q15651 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.35□□□□□ -1.87
HMGN3Q15651 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.35□□□□□ -1.87
HMGN3Q15651 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HMGN3Q15651 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.35□□□□□ -1.87
HMGN3Q15651 MIR5047-201ENST00000579212 100 ntBASIC3.35□□□□□ -1.87
HMGN3Q15651 MIR6730-201ENST00000622213 67 ntBASIC3.35□□□□□ -1.87
HMGN3Q15651 CR381670.1-201ENST00000624291 1693 ntBASIC3.35□□□□□ -1.87
HMGN3Q15651 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.35□□□□□ -1.87
HMGN3Q15651 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.35□□□□□ -1.87
HMGN3Q15651 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
HMGN3Q15651 LARP1BP1-201ENST00000506036 1359 ntBASIC3.35□□□□□ -1.87
HMGN3Q15651 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HMGN3Q15651 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
HMGN3Q15651 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.35□□□□□ -1.87
HMGN3Q15651 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HMGN3Q15651 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HMGN3Q15651 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
HMGN3Q15651 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.34□□□□□ -1.87
HMGN3Q15651 SNORA62.2-201ENST00000364672 152 ntBASIC3.34□□□□□ -1.87
HMGN3Q15651 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.34□□□□□ -1.87
HMGN3Q15651 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.34□□□□□ -1.87
HMGN3Q15651 AL590806.1-201ENST00000415818 853 ntBASIC3.34□□□□□ -1.87
HMGN3Q15651 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.34□□□□□ -1.87
HMGN3Q15651 KCTD9P3-201ENST00000434597 1169 ntBASIC3.34□□□□□ -1.87
HMGN3Q15651 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.34□□□□□ -1.87
HMGN3Q15651 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGN3Q15651 AC245517.2-201ENST00000442890 346 ntBASIC3.34□□□□□ -1.87
HMGN3Q15651 RPS4XP4-201ENST00000443195 763 ntBASIC3.34□□□□□ -1.87
HMGN3Q15651 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.34□□□□□ -1.87
HMGN3Q15651 FCF1P7-201ENST00000451185 558 ntBASIC3.34□□□□□ -1.87
HMGN3Q15651 AC092691.2-201ENST00000461787 803 ntBASIC3.34□□□□□ -1.87
HMGN3Q15651 RPS27AP13-201ENST00000498403 237 ntBASIC3.34□□□□□ -1.87
HMGN3Q15651 AC138409.2-202ENST00000507274 458 ntBASIC3.34□□□□□ -1.87
HMGN3Q15651 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGN3Q15651 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HMGN3Q15651 TOMM20P2-201ENST00000540082 421 ntBASIC3.34□□□□□ -1.87
HMGN3Q15651 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
HMGN3Q15651 AC092747.2-201ENST00000545069 983 ntBASIC3.34□□□□□ -1.87
HMGN3Q15651 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGN3Q15651 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGN3Q15651 AC099489.2-201ENST00000574976 260 ntBASIC3.34□□□□□ -1.87
HMGN3Q15651 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGN3Q15651 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.34□□□□□ -1.87
HMGN3Q15651 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HMGN3Q15651 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HMGN3Q15651 AC006116.5-201ENST00000591936 559 ntBASIC3.34□□□□□ -1.87
HMGN3Q15651 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.34□□□□□ -1.87
HMGN3Q15651 AC011492.1-201ENST00000600023 315 ntBASIC3.34□□□□□ -1.87
HMGN3Q15651 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms