Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC3.2□□□□□ -1.9
SSBP1Q04837 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.2□□□□□ -1.9
SSBP1Q04837 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.2□□□□□ -1.9
SSBP1Q04837 AL445528.2-201ENST00000620582 470 ntBASIC3.2□□□□□ -1.9
SSBP1Q04837 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.2□□□□□ -1.9
SSBP1Q04837 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SSBP1Q04837 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.2□□□□□ -1.9
SSBP1Q04837 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SSBP1Q04837 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SSBP1Q04837 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SSBP1Q04837 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SSBP1Q04837 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SSBP1Q04837 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
SSBP1Q04837 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SSBP1Q04837 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.19□□□□□ -1.9
SSBP1Q04837 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
SSBP1Q04837 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SSBP1Q04837 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SSBP1Q04837 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
SSBP1Q04837 RNA5SP366-201ENST00000365454 123 ntBASIC3.19□□□□□ -1.9
SSBP1Q04837 AC019155.1-201ENST00000382242 574 ntBASIC3.19□□□□□ -1.9
SSBP1Q04837 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SSBP1Q04837 RNA5SP424-201ENST00000390988 115 ntBASIC3.19□□□□□ -1.9
SSBP1Q04837 SKINT1L-201ENST00000401057 817 ntBASIC3.19□□□□□ -1.9
SSBP1Q04837 AL512430.2-201ENST00000406786 339 ntBASIC3.19□□□□□ -1.9
SSBP1Q04837 MRPS18BP2-201ENST00000434310 759 ntBASIC3.19□□□□□ -1.9
SSBP1Q04837 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SSBP1Q04837 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.19□□□□□ -1.9
SSBP1Q04837 AC073264.2-201ENST00000448886 166 ntBASIC3.19□□□□□ -1.9
SSBP1Q04837 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.19□□□□□ -1.9
SSBP1Q04837 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SSBP1Q04837 RN7SL629P-201ENST00000489622 285 ntBASIC3.19□□□□□ -1.9
SSBP1Q04837 AC068305.1-201ENST00000497406 726 ntBASIC3.19□□□□□ -1.9
SSBP1Q04837 RPS27AP13-201ENST00000498403 237 ntBASIC3.19□□□□□ -1.9
SSBP1Q04837 AC020893.1-201ENST00000502452 580 ntBASIC3.19□□□□□ -1.9
SSBP1Q04837 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SSBP1Q04837 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SSBP1Q04837 AC138409.2-202ENST00000507274 458 ntBASIC3.19□□□□□ -1.9
SSBP1Q04837 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.19□□□□□ -1.9
SSBP1Q04837 RNA5SP179-201ENST00000517284 121 ntBASIC3.19□□□□□ -1.9
SSBP1Q04837 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC3.19□□□□□ -1.9
SSBP1Q04837 PSMB7P1-201ENST00000556349 514 ntBASIC3.19□□□□□ -1.9
SSBP1Q04837 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.19□□□□□ -1.9
SSBP1Q04837 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.19□□□□□ -1.9
SSBP1Q04837 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.19□□□□□ -1.9
SSBP1Q04837 AC093765.1-201ENST00000603758 881 ntBASIC3.19□□□□□ -1.9
SSBP1Q04837 AC091167.4-201ENST00000605079 184 ntBASIC3.19□□□□□ -1.9
SSBP1Q04837 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.19□□□□□ -1.9
SSBP1Q04837 AC110801.1-201ENST00000623590 212 ntBASIC3.19□□□□□ -1.9
SSBP1Q04837 AC074029.4-201ENST00000624796 1859 ntBASIC3.19□□□□□ -1.9
SSBP1Q04837 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.19□□□□□ -1.9
SSBP1Q04837 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.19□□□□□ -1.9
SSBP1Q04837 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
SSBP1Q04837 AC109780.1-201ENST00000451768 1344 ntBASIC3.19□□□□□ -1.9
SSBP1Q04837 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
SSBP1Q04837 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
SSBP1Q04837 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SSBP1Q04837 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SSBP1Q04837 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SSBP1Q04837 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.18□□□□□ -1.9
SSBP1Q04837 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SSBP1Q04837 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SSBP1Q04837 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SSBP1Q04837 OR4K17-201ENST00000315543 1032 ntBASIC3.18□□□□□ -1.9
SSBP1Q04837 RNA5SP235-201ENST00000365411 114 ntBASIC3.18□□□□□ -1.9
SSBP1Q04837 ENSAP1-201ENST00000392855 326 ntBASIC3.18□□□□□ -1.9
SSBP1Q04837 MTHFD2P2-201ENST00000407725 247 ntBASIC3.18□□□□□ -1.9
SSBP1Q04837 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.18□□□□□ -1.9
SSBP1Q04837 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.18□□□□□ -1.9
SSBP1Q04837 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.18□□□□□ -1.9
SSBP1Q04837 HMGB3P20-201ENST00000417997 600 ntBASIC3.18□□□□□ -1.9
SSBP1Q04837 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SSBP1Q04837 RPS15AP6-201ENST00000420703 385 ntBASIC3.18□□□□□ -1.9
SSBP1Q04837 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.18□□□□□ -1.9
SSBP1Q04837 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.18□□□□□ -1.9
SSBP1Q04837 AL627308.1-201ENST00000435693 821 ntBASIC3.18□□□□□ -1.9
SSBP1Q04837 AL357520.1-201ENST00000441557 453 ntBASIC3.18□□□□□ -1.9
SSBP1Q04837 TXNP2-201ENST00000443918 295 ntBASIC3.18□□□□□ -1.9
SSBP1Q04837 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.18□□□□□ -1.9
SSBP1Q04837 HMGB3P8-201ENST00000449709 577 ntBASIC3.18□□□□□ -1.9
SSBP1Q04837 MRPS31P2-201ENST00000451581 518 ntBASIC3.18□□□□□ -1.9
SSBP1Q04837 AL136097.1-201ENST00000456945 913 ntBASIC3.18□□□□□ -1.9
SSBP1Q04837 RPS4XP22-201ENST00000480755 780 ntBASIC3.18□□□□□ -1.9
SSBP1Q04837 RPS3AP6-201ENST00000484430 795 ntBASIC3.18□□□□□ -1.9
SSBP1Q04837 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.18□□□□□ -1.9
SSBP1Q04837 OR5M14P-201ENST00000506803 618 ntBASIC3.18□□□□□ -1.9
SSBP1Q04837 RAC1P2-201ENST00000511164 579 ntBASIC3.18□□□□□ -1.9
SSBP1Q04837 AC011602.1-201ENST00000546484 331 ntBASIC3.18□□□□□ -1.9
SSBP1Q04837 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.18□□□□□ -1.9
SSBP1Q04837 AP005901.4-201ENST00000577336 569 ntBASIC3.18□□□□□ -1.9
SSBP1Q04837 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SSBP1Q04837 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SSBP1Q04837 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SSBP1Q04837 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SSBP1Q04837 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.18□□□□□ -1.9
SSBP1Q04837 MIR8059-201ENST00000620427 81 ntBASIC3.18□□□□□ -1.9
SSBP1Q04837 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.18□□□□□ -1.9
SSBP1Q04837 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SSBP1Q04837 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
SSBP1Q04837 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms