Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC068020.1-201ENST00000594215 661 ntBASIC3.96□□□□□ -1.78
HMGCS1Q01581 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.96□□□□□ -1.78
HMGCS1Q01581 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.96□□□□□ -1.78
HMGCS1Q01581 AC034236.3-201ENST00000605999 461 ntBASIC3.96□□□□□ -1.78
HMGCS1Q01581 AC007620.3-201ENST00000608131 497 ntBASIC3.96□□□□□ -1.78
HMGCS1Q01581 AC019131.2-201ENST00000609071 870 ntBASIC3.96□□□□□ -1.78
HMGCS1Q01581 MIR378J-201ENST00000611988 109 ntBASIC3.96□□□□□ -1.78
HMGCS1Q01581 AC116447.1-201ENST00000613153 453 ntBASIC3.96□□□□□ -1.78
HMGCS1Q01581 AC114781.5-201ENST00000615297 108 ntBASIC3.96□□□□□ -1.78
HMGCS1Q01581 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.96□□□□□ -1.78
HMGCS1Q01581 AC233309.1-201ENST00000619522 751 ntBASIC3.96□□□□□ -1.78
HMGCS1Q01581 AP005264.7-201ENST00000625003 745 ntBASIC3.96□□□□□ -1.78
HMGCS1Q01581 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.96□□□□□ -1.78
HMGCS1Q01581 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
HMGCS1Q01581 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HMGCS1Q01581 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HMGCS1Q01581 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
HMGCS1Q01581 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HMGCS1Q01581 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.95□□□□□ -1.78
HMGCS1Q01581 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HMGCS1Q01581 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
HMGCS1Q01581 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HMGCS1Q01581 CASC19-284ENST00000642142 1868 ntBASIC3.95□□□□□ -1.78
HMGCS1Q01581 CCT8P1-201ENST00000413611 1657 ntBASIC3.95□□□□□ -1.78
HMGCS1Q01581 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HMGCS1Q01581 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HMGCS1Q01581 RNA5SP513-201ENST00000364648 118 ntBASIC3.95□□□□□ -1.78
HMGCS1Q01581 AL161909.1-201ENST00000397390 712 ntBASIC3.95□□□□□ -1.78
HMGCS1Q01581 RNU6-564P-201ENST00000410983 104 ntBASIC3.95□□□□□ -1.78
HMGCS1Q01581 RNA5SP39-201ENST00000411245 120 ntBASIC3.95□□□□□ -1.78
HMGCS1Q01581 RNU6-603P-201ENST00000411403 107 ntBASIC3.95□□□□□ -1.78
HMGCS1Q01581 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.95□□□□□ -1.78
HMGCS1Q01581 JKAMPP1-201ENST00000413804 919 ntBASIC3.95□□□□□ -1.78
HMGCS1Q01581 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.95□□□□□ -1.78
HMGCS1Q01581 MTCO1P54-201ENST00000430139 712 ntBASIC3.95□□□□□ -1.78
HMGCS1Q01581 COX6B1P7-201ENST00000430845 235 ntBASIC3.95□□□□□ -1.78
HMGCS1Q01581 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.95□□□□□ -1.78
HMGCS1Q01581 ACTR3P2-201ENST00000439585 1257 ntBASIC3.95□□□□□ -1.78
HMGCS1Q01581 AC006011.1-201ENST00000442758 349 ntBASIC3.95□□□□□ -1.78
HMGCS1Q01581 RPL36AP13-201ENST00000457490 317 ntBASIC3.95□□□□□ -1.78
HMGCS1Q01581 RPS20P4-201ENST00000461659 355 ntBASIC3.95□□□□□ -1.78
HMGCS1Q01581 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.95□□□□□ -1.78
HMGCS1Q01581 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.95□□□□□ -1.78
HMGCS1Q01581 AC083829.1-201ENST00000503756 657 ntBASIC3.95□□□□□ -1.78
HMGCS1Q01581 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HMGCS1Q01581 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HMGCS1Q01581 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.95□□□□□ -1.78
HMGCS1Q01581 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.95□□□□□ -1.78
HMGCS1Q01581 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.95□□□□□ -1.78
HMGCS1Q01581 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.95□□□□□ -1.78
HMGCS1Q01581 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HMGCS1Q01581 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.95□□□□□ -1.78
HMGCS1Q01581 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HMGCS1Q01581 AL451044.1-201ENST00000604867 238 ntBASIC3.95□□□□□ -1.78
HMGCS1Q01581 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.95□□□□□ -1.78
HMGCS1Q01581 AC012213.4-201ENST00000606457 354 ntBASIC3.95□□□□□ -1.78
HMGCS1Q01581 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.95□□□□□ -1.78
HMGCS1Q01581 AL445423.1-201ENST00000609941 536 ntBASIC3.95□□□□□ -1.78
HMGCS1Q01581 AL158196.1-201ENST00000616786 434 ntBASIC3.95□□□□□ -1.78
HMGCS1Q01581 AP000843.1-201ENST00000624880 701 ntBASIC3.95□□□□□ -1.78
HMGCS1Q01581 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.95□□□□□ -1.78
HMGCS1Q01581 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.95□□□□□ -1.78
HMGCS1Q01581 AL773545.4-201ENST00000637262 310 ntBASIC3.95□□□□□ -1.78
HMGCS1Q01581 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.95□□□□□ -1.78
HMGCS1Q01581 AL513478.4-201ENST00000641636 310 ntBASIC3.95□□□□□ -1.78
HMGCS1Q01581 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HMGCS1Q01581 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HMGCS1Q01581 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.95□□□□□ -1.78
HMGCS1Q01581 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HMGCS1Q01581 AC116667.1-201ENST00000604855 2072 ntBASIC3.94□□□□□ -1.78
HMGCS1Q01581 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.94□□□□□ -1.78
HMGCS1Q01581 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.94□□□□□ -1.78
HMGCS1Q01581 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
HMGCS1Q01581 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
HMGCS1Q01581 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.94□□□□□ -1.78
HMGCS1Q01581 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HMGCS1Q01581 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HMGCS1Q01581 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HMGCS1Q01581 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
HMGCS1Q01581 RNA5SP366-201ENST00000365454 123 ntBASIC3.94□□□□□ -1.78
HMGCS1Q01581 MT-TP-201ENST00000387461 68 ntBASIC3.94□□□□□ -1.78
HMGCS1Q01581 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HMGCS1Q01581 AL034403.1-201ENST00000399414 885 ntBASIC3.94□□□□□ -1.78
HMGCS1Q01581 AJ239321.1-201ENST00000424255 564 ntBASIC3.94□□□□□ -1.78
HMGCS1Q01581 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.94□□□□□ -1.78
HMGCS1Q01581 AL392003.1-201ENST00000434394 243 ntBASIC3.94□□□□□ -1.78
HMGCS1Q01581 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.94□□□□□ -1.78
HMGCS1Q01581 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.94□□□□□ -1.78
HMGCS1Q01581 AC009963.2-201ENST00000453431 138 ntBASIC3.94□□□□□ -1.78
HMGCS1Q01581 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.94□□□□□ -1.78
HMGCS1Q01581 LARP7P4-201ENST00000481075 878 ntBASIC3.94□□□□□ -1.78
HMGCS1Q01581 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
HMGCS1Q01581 ATG10-AS1-201ENST00000504846 648 ntBASIC3.94□□□□□ -1.78
HMGCS1Q01581 AC106806.2-201ENST00000509365 500 ntBASIC3.94□□□□□ -1.78
HMGCS1Q01581 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HMGCS1Q01581 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.94□□□□□ -1.78
HMGCS1Q01581 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
HMGCS1Q01581 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.94□□□□□ -1.78
HMGCS1Q01581 AC009268.1-201ENST00000561352 1203 ntBASIC3.94□□□□□ -1.78
HMGCS1Q01581 AC027281.1-201ENST00000574178 758 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms