Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AL359715.5-201ENST00000623431 443 ntBASIC3.69□□□□□ -1.82
H3F3AP84243 AC010608.2-201ENST00000624830 470 ntBASIC3.69□□□□□ -1.82
H3F3AP84243 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
H3F3AP84243 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.69□□□□□ -1.82
H3F3AP84243 Z73965.1-201ENST00000623412 2297 ntBASIC3.69□□□□□ -1.82
H3F3AP84243 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.69□□□□□ -1.82
H3F3AP84243 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
H3F3AP84243 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
H3F3AP84243 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
H3F3AP84243 AL356489.2-201ENST00000566968 3528 ntBASIC3.69□□□□□ -1.82
H3F3AP84243 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
H3F3AP84243 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
H3F3AP84243 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.68□□□□□ -1.82
H3F3AP84243 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
H3F3AP84243 RNA5SP388-201ENST00000362584 119 ntBASIC3.68□□□□□ -1.82
H3F3AP84243 AL450992.3-201ENST00000413192 568 ntBASIC3.68□□□□□ -1.82
H3F3AP84243 COX6CP17-201ENST00000421389 185 ntBASIC3.68□□□□□ -1.82
H3F3AP84243 RWDD4P2-201ENST00000426392 563 ntBASIC3.68□□□□□ -1.82
H3F3AP84243 C4BPAP2-201ENST00000428434 478 ntBASIC3.68□□□□□ -1.82
H3F3AP84243 MRPL50P1-201ENST00000431951 384 ntBASIC3.68□□□□□ -1.82
H3F3AP84243 RWDD4P1-201ENST00000488019 565 ntBASIC3.68□□□□□ -1.82
H3F3AP84243 RN7SL604P-201ENST00000492589 296 ntBASIC3.68□□□□□ -1.82
H3F3AP84243 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.68□□□□□ -1.82
H3F3AP84243 MRPL49P2-201ENST00000521066 465 ntBASIC3.68□□□□□ -1.82
H3F3AP84243 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.68□□□□□ -1.82
H3F3AP84243 MTND1P6-201ENST00000523621 946 ntBASIC3.68□□□□□ -1.82
H3F3AP84243 UBTFL9-201ENST00000534504 1148 ntBASIC3.68□□□□□ -1.82
H3F3AP84243 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.68□□□□□ -1.82
H3F3AP84243 AC136624.4-201ENST00000573044 370 ntBASIC3.68□□□□□ -1.82
H3F3AP84243 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.68□□□□□ -1.82
H3F3AP84243 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.68□□□□□ -1.82
H3F3AP84243 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
H3F3AP84243 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC3.68□□□□□ -1.82
H3F3AP84243 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.68□□□□□ -1.82
H3F3AP84243 AC233309.1-201ENST00000619522 751 ntBASIC3.68□□□□□ -1.82
H3F3AP84243 PHKBP1-201ENST00000450951 1951 ntBASIC3.68□□□□□ -1.82
H3F3AP84243 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
H3F3AP84243 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
H3F3AP84243 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.68□□□□□ -1.82
H3F3AP84243 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
H3F3AP84243 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
H3F3AP84243 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.67□□□□□ -1.82
H3F3AP84243 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
H3F3AP84243 AC083899.2-201ENST00000423285 1376 ntBASIC3.67□□□□□ -1.82
H3F3AP84243 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
H3F3AP84243 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
H3F3AP84243 ENSAP1-201ENST00000392855 326 ntBASIC3.67□□□□□ -1.82
H3F3AP84243 AC108032.1-201ENST00000416706 207 ntBASIC3.67□□□□□ -1.82
H3F3AP84243 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
H3F3AP84243 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.67□□□□□ -1.82
H3F3AP84243 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
H3F3AP84243 AL358472.1-201ENST00000431295 329 ntBASIC3.67□□□□□ -1.82
H3F3AP84243 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.67□□□□□ -1.82
H3F3AP84243 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.67□□□□□ -1.82
H3F3AP84243 TPT1P12-201ENST00000448968 492 ntBASIC3.67□□□□□ -1.82
H3F3AP84243 PPIAP21-201ENST00000464473 501 ntBASIC3.67□□□□□ -1.82
H3F3AP84243 RPS26P15-201ENST00000488067 348 ntBASIC3.67□□□□□ -1.82
H3F3AP84243 RNU7-143P-201ENST00000516781 65 ntBASIC3.67□□□□□ -1.82
H3F3AP84243 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.67□□□□□ -1.82
H3F3AP84243 OR8X1P-201ENST00000534542 869 ntBASIC3.67□□□□□ -1.82
H3F3AP84243 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.67□□□□□ -1.82
H3F3AP84243 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.67□□□□□ -1.82
H3F3AP84243 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.67□□□□□ -1.82
H3F3AP84243 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
H3F3AP84243 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
H3F3AP84243 AC114878.2-201ENST00000604863 1251 ntBASIC3.67□□□□□ -1.82
H3F3AP84243 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC3.67□□□□□ -1.82
H3F3AP84243 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
H3F3AP84243 AC090506.2-201ENST00000624521 419 ntBASIC3.67□□□□□ -1.82
H3F3AP84243 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
H3F3AP84243 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.67□□□□□ -1.82
H3F3AP84243 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
H3F3AP84243 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
H3F3AP84243 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.67□□□□□ -1.82
H3F3AP84243 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
H3F3AP84243 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.67□□□□□ -1.82
H3F3AP84243 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
H3F3AP84243 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
H3F3AP84243 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.66□□□□□ -1.82
H3F3AP84243 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.66□□□□□ -1.82
H3F3AP84243 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
H3F3AP84243 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
H3F3AP84243 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
H3F3AP84243 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
H3F3AP84243 OR10AB1P-202ENST00000641219 1686 ntBASIC3.66□□□□□ -1.82
H3F3AP84243 OR11H4-201ENST00000315409 1082 ntBASIC3.66□□□□□ -1.82
H3F3AP84243 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
H3F3AP84243 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.66□□□□□ -1.82
H3F3AP84243 SNORA60-201ENST00000362396 134 ntBASIC3.66□□□□□ -1.82
H3F3AP84243 SNORA70.2-201ENST00000364506 135 ntBASIC3.66□□□□□ -1.82
H3F3AP84243 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
H3F3AP84243 SNORA70C-201ENST00000384538 135 ntBASIC3.66□□□□□ -1.82
H3F3AP84243 AP000357.1-201ENST00000409926 1165 ntBASIC3.66□□□□□ -1.82
H3F3AP84243 OR8G2P-201ENST00000412796 908 ntBASIC3.66□□□□□ -1.82
H3F3AP84243 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.66□□□□□ -1.82
H3F3AP84243 AC096644.3-201ENST00000416788 338 ntBASIC3.66□□□□□ -1.82
H3F3AP84243 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.66□□□□□ -1.82
H3F3AP84243 RSL24D1P6-201ENST00000426934 401 ntBASIC3.66□□□□□ -1.82
H3F3AP84243 AL356276.2-201ENST00000435919 558 ntBASIC3.66□□□□□ -1.82
H3F3AP84243 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 154.3 ms