Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 VDAC1P6-201ENST00000430062 855 ntBASIC3.59□□□□□ -1.83
HIST1H3AP68431 AL358472.1-201ENST00000431295 329 ntBASIC3.59□□□□□ -1.83
HIST1H3AP68431 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.59□□□□□ -1.83
HIST1H3AP68431 UQCRHP4-201ENST00000471686 272 ntBASIC3.59□□□□□ -1.83
HIST1H3AP68431 RN7SL481P-201ENST00000477764 299 ntBASIC3.59□□□□□ -1.83
HIST1H3AP68431 RN7SL271P-201ENST00000487601 295 ntBASIC3.59□□□□□ -1.83
HIST1H3AP68431 RPS23P1-201ENST00000491662 432 ntBASIC3.59□□□□□ -1.83
HIST1H3AP68431 RPS27AP13-201ENST00000498403 237 ntBASIC3.59□□□□□ -1.83
HIST1H3AP68431 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.59□□□□□ -1.83
HIST1H3AP68431 KRT19P6-201ENST00000510983 209 ntBASIC3.59□□□□□ -1.83
HIST1H3AP68431 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.59□□□□□ -1.83
HIST1H3AP68431 RNU6-347P-201ENST00000516658 105 ntBASIC3.59□□□□□ -1.83
HIST1H3AP68431 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.59□□□□□ -1.83
HIST1H3AP68431 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.59□□□□□ -1.83
HIST1H3AP68431 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.59□□□□□ -1.83
HIST1H3AP68431 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.59□□□□□ -1.83
HIST1H3AP68431 RPL23AP87-202ENST00000573039 466 ntBASIC3.59□□□□□ -1.83
HIST1H3AP68431 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.59□□□□□ -1.83
HIST1H3AP68431 MIR3138-201ENST00000585238 82 ntBASIC3.59□□□□□ -1.83
HIST1H3AP68431 AC110741.2-201ENST00000605278 268 ntBASIC3.59□□□□□ -1.83
HIST1H3AP68431 MIR8059-201ENST00000620427 81 ntBASIC3.59□□□□□ -1.83
HIST1H3AP68431 AC095038.2-201ENST00000621464 1070 ntBASIC3.59□□□□□ -1.83
HIST1H3AP68431 CFTRP2-201ENST00000634304 199 ntBASIC3.59□□□□□ -1.83
HIST1H3AP68431 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HIST1H3AP68431 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
HIST1H3AP68431 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HIST1H3AP68431 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.59□□□□□ -1.84
HIST1H3AP68431 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
HIST1H3AP68431 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
HIST1H3AP68431 MAPK10-253ENST00000641010 4072 ntBASIC3.59□□□□□ -1.84
HIST1H3AP68431 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
HIST1H3AP68431 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HIST1H3AP68431 AC018555.1-201ENST00000567548 1980 ntBASIC3.58□□□□□ -1.84
HIST1H3AP68431 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC3.58□□□□□ -1.84
HIST1H3AP68431 PNPT1P2-201ENST00000456768 2050 ntBASIC3.58□□□□□ -1.84
HIST1H3AP68431 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HIST1H3AP68431 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
HIST1H3AP68431 MIR383-201ENST00000362257 73 ntBASIC3.58□□□□□ -1.84
HIST1H3AP68431 RNA5SP306-201ENST00000411087 107 ntBASIC3.58□□□□□ -1.84
HIST1H3AP68431 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.58□□□□□ -1.84
HIST1H3AP68431 MTND2P11-201ENST00000423638 648 ntBASIC3.58□□□□□ -1.84
HIST1H3AP68431 RPL18P10-201ENST00000425606 538 ntBASIC3.58□□□□□ -1.84
HIST1H3AP68431 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.58□□□□□ -1.84
HIST1H3AP68431 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.58□□□□□ -1.84
HIST1H3AP68431 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.58□□□□□ -1.84
HIST1H3AP68431 RPL7AP52-201ENST00000458096 790 ntBASIC3.58□□□□□ -1.84
HIST1H3AP68431 RPL23AP71-201ENST00000470966 469 ntBASIC3.58□□□□□ -1.84
HIST1H3AP68431 AP000926.1-201ENST00000479573 241 ntBASIC3.58□□□□□ -1.84
HIST1H3AP68431 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.58□□□□□ -1.84
HIST1H3AP68431 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.58□□□□□ -1.84
HIST1H3AP68431 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.58□□□□□ -1.84
HIST1H3AP68431 AC034205.1-201ENST00000520621 638 ntBASIC3.58□□□□□ -1.84
HIST1H3AP68431 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.58□□□□□ -1.84
HIST1H3AP68431 AP003730.1-201ENST00000524605 285 ntBASIC3.58□□□□□ -1.84
HIST1H3AP68431 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.58□□□□□ -1.84
HIST1H3AP68431 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.58□□□□□ -1.84
HIST1H3AP68431 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.58□□□□□ -1.84
HIST1H3AP68431 AC022968.1-201ENST00000567372 442 ntBASIC3.58□□□□□ -1.84
HIST1H3AP68431 AC068020.1-201ENST00000594215 661 ntBASIC3.58□□□□□ -1.84
HIST1H3AP68431 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.58□□□□□ -1.84
HIST1H3AP68431 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.58□□□□□ -1.84
HIST1H3AP68431 AC090246.1-201ENST00000616499 426 ntBASIC3.58□□□□□ -1.84
HIST1H3AP68431 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.58□□□□□ -1.84
HIST1H3AP68431 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC3.58□□□□□ -1.84
HIST1H3AP68431 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HIST1H3AP68431 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HIST1H3AP68431 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.58□□□□□ -1.84
HIST1H3AP68431 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.58□□□□□ -1.84
HIST1H3AP68431 USP9YP4-201ENST00000424401 1745 ntBASIC3.58□□□□□ -1.84
HIST1H3AP68431 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.58□□□□□ -1.84
HIST1H3AP68431 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.58□□□□□ -1.84
HIST1H3AP68431 AC007529.1-201ENST00000418574 2178 ntBASIC3.58□□□□□ -1.84
HIST1H3AP68431 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HIST1H3AP68431 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HIST1H3AP68431 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.57□□□□□ -1.84
HIST1H3AP68431 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HIST1H3AP68431 AL138878.1-201ENST00000405131 347 ntBASIC3.57□□□□□ -1.84
HIST1H3AP68431 RNA5SP239-201ENST00000410218 129 ntBASIC3.57□□□□□ -1.84
HIST1H3AP68431 RN7SKP56-201ENST00000410513 331 ntBASIC3.57□□□□□ -1.84
HIST1H3AP68431 RN7SKP33-201ENST00000410942 340 ntBASIC3.57□□□□□ -1.84
HIST1H3AP68431 AC016397.1-201ENST00000412463 242 ntBASIC3.57□□□□□ -1.84
HIST1H3AP68431 AL590806.1-201ENST00000415818 853 ntBASIC3.57□□□□□ -1.84
HIST1H3AP68431 AC092647.1-201ENST00000420654 287 ntBASIC3.57□□□□□ -1.84
HIST1H3AP68431 AC093084.1-201ENST00000424233 687 ntBASIC3.57□□□□□ -1.84
HIST1H3AP68431 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.57□□□□□ -1.84
HIST1H3AP68431 AC011742.1-201ENST00000431448 434 ntBASIC3.57□□□□□ -1.84
HIST1H3AP68431 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.57□□□□□ -1.84
HIST1H3AP68431 TPTE2P3-201ENST00000441562 1189 ntBASIC3.57□□□□□ -1.84
HIST1H3AP68431 RPL7P31-201ENST00000450192 724 ntBASIC3.57□□□□□ -1.84
HIST1H3AP68431 HMGB3P21-201ENST00000452483 547 ntBASIC3.57□□□□□ -1.84
HIST1H3AP68431 AC069277.2-201ENST00000454211 432 ntBASIC3.57□□□□□ -1.84
HIST1H3AP68431 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.57□□□□□ -1.84
HIST1H3AP68431 RPL31P61-201ENST00000496160 376 ntBASIC3.57□□□□□ -1.84
HIST1H3AP68431 AC017007.4-201ENST00000503353 1352 ntBASIC3.57□□□□□ -1.84
HIST1H3AP68431 AC106806.2-201ENST00000509365 500 ntBASIC3.57□□□□□ -1.84
HIST1H3AP68431 MIR2114-201ENST00000516645 80 ntBASIC3.57□□□□□ -1.84
HIST1H3AP68431 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.57□□□□□ -1.84
HIST1H3AP68431 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HIST1H3AP68431 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.57□□□□□ -1.84
HIST1H3AP68431 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms