Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC068790.7-201ENST00000602347 528 ntBASIC4.47□□□□□ -1.69
TPM4P67936 AC093765.1-201ENST00000603758 881 ntBASIC4.47□□□□□ -1.69
TPM4P67936 MIR6780A-201ENST00000615089 68 ntBASIC4.47□□□□□ -1.69
TPM4P67936 AC000123.2-201ENST00000623124 461 ntBASIC4.47□□□□□ -1.69
TPM4P67936 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TPM4P67936 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TPM4P67936 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.47□□□□□ -1.69
TPM4P67936 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.47□□□□□ -1.69
TPM4P67936 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.47□□□□□ -1.69
TPM4P67936 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.47□□□□□ -1.69
TPM4P67936 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.46□□□□□ -1.69
TPM4P67936 RNU1-18P-201ENST00000363062 164 ntBASIC4.46□□□□□ -1.7
TPM4P67936 RPS3AP23-201ENST00000401762 784 ntBASIC4.46□□□□□ -1.7
TPM4P67936 SNORA11.3-201ENST00000408471 128 ntBASIC4.46□□□□□ -1.7
TPM4P67936 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TPM4P67936 BX510359.3-201ENST00000422168 306 ntBASIC4.46□□□□□ -1.7
TPM4P67936 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.46□□□□□ -1.7
TPM4P67936 BMS1P19-201ENST00000433925 393 ntBASIC4.46□□□□□ -1.7
TPM4P67936 HMGB1P37-201ENST00000439613 609 ntBASIC4.46□□□□□ -1.7
TPM4P67936 AC073264.2-201ENST00000448886 166 ntBASIC4.46□□□□□ -1.7
TPM4P67936 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.46□□□□□ -1.7
TPM4P67936 FCF1P7-201ENST00000451185 558 ntBASIC4.46□□□□□ -1.7
TPM4P67936 RPL38P1-201ENST00000460914 211 ntBASIC4.46□□□□□ -1.7
TPM4P67936 PPIAP21-201ENST00000464473 501 ntBASIC4.46□□□□□ -1.7
TPM4P67936 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.46□□□□□ -1.7
TPM4P67936 IGBP1P5-201ENST00000507524 1000 ntBASIC4.46□□□□□ -1.7
TPM4P67936 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.46□□□□□ -1.7
TPM4P67936 AC008958.1-201ENST00000511047 682 ntBASIC4.46□□□□□ -1.7
TPM4P67936 AC021146.1-201ENST00000511202 716 ntBASIC4.46□□□□□ -1.7
TPM4P67936 SNORD116-26-201ENST00000516006 96 ntBASIC4.46□□□□□ -1.7
TPM4P67936 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.46□□□□□ -1.7
TPM4P67936 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.46□□□□□ -1.7
TPM4P67936 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.46□□□□□ -1.7
TPM4P67936 AC068714.1-201ENST00000559623 800 ntBASIC4.46□□□□□ -1.7
TPM4P67936 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.46□□□□□ -1.7
TPM4P67936 AL161912.3-201ENST00000605404 628 ntBASIC4.46□□□□□ -1.7
TPM4P67936 FAM25E-202ENST00000608562 189 ntBASIC4.46□□□□□ -1.7
TPM4P67936 SNORA11.6-201ENST00000619030 128 ntBASIC4.46□□□□□ -1.7
TPM4P67936 AL139089.1-201ENST00000620372 975 ntBASIC4.46□□□□□ -1.7
TPM4P67936 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.46□□□□□ -1.7
TPM4P67936 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.46□□□□□ -1.7
TPM4P67936 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TPM4P67936 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TPM4P67936 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TPM4P67936 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TPM4P67936 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TPM4P67936 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TPM4P67936 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
TPM4P67936 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
TPM4P67936 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TPM4P67936 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.45□□□□□ -1.7
TPM4P67936 HLFP1-201ENST00000402375 499 ntBASIC4.45□□□□□ -1.7
TPM4P67936 CHIAP3-201ENST00000423668 1133 ntBASIC4.45□□□□□ -1.7
TPM4P67936 NPM1P34-201ENST00000428821 893 ntBASIC4.45□□□□□ -1.7
TPM4P67936 HIGD1AP4-201ENST00000430194 280 ntBASIC4.45□□□□□ -1.7
TPM4P67936 PTMAP6-201ENST00000439110 327 ntBASIC4.45□□□□□ -1.7
TPM4P67936 AC009963.2-201ENST00000453431 138 ntBASIC4.45□□□□□ -1.7
TPM4P67936 METTL15P1-201ENST00000481421 1045 ntBASIC4.45□□□□□ -1.7
TPM4P67936 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.45□□□□□ -1.7
TPM4P67936 AC010476.1-201ENST00000519111 851 ntBASIC4.45□□□□□ -1.7
TPM4P67936 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.45□□□□□ -1.7
TPM4P67936 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.45□□□□□ -1.7
TPM4P67936 AGGF1P8-201ENST00000562979 1000 ntBASIC4.45□□□□□ -1.7
TPM4P67936 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.45□□□□□ -1.7
TPM4P67936 OR7E18P-201ENST00000592589 702 ntBASIC4.45□□□□□ -1.7
TPM4P67936 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TPM4P67936 MIR6729-201ENST00000618194 65 ntBASIC4.45□□□□□ -1.7
TPM4P67936 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.45□□□□□ -1.7
TPM4P67936 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
TPM4P67936 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.45□□□□□ -1.7
TPM4P67936 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TPM4P67936 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TPM4P67936 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
TPM4P67936 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TPM4P67936 MIR105-2-201ENST00000385083 81 ntBASIC4.44□□□□□ -1.7
TPM4P67936 AL035419.1-201ENST00000397037 564 ntBASIC4.44□□□□□ -1.7
TPM4P67936 AL450992.3-201ENST00000413192 568 ntBASIC4.44□□□□□ -1.7
TPM4P67936 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.44□□□□□ -1.7
TPM4P67936 COX6B1P7-201ENST00000430845 235 ntBASIC4.44□□□□□ -1.7
TPM4P67936 RPL12P28-201ENST00000430852 489 ntBASIC4.44□□□□□ -1.7
TPM4P67936 BTG3P1-201ENST00000435859 716 ntBASIC4.44□□□□□ -1.7
TPM4P67936 RPS4XP4-201ENST00000443195 763 ntBASIC4.44□□□□□ -1.7
TPM4P67936 RN7SL738P-201ENST00000470264 297 ntBASIC4.44□□□□□ -1.7
TPM4P67936 AC099522.1-202ENST00000514718 367 ntBASIC4.44□□□□□ -1.7
TPM4P67936 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.44□□□□□ -1.7
TPM4P67936 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.44□□□□□ -1.7
TPM4P67936 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.44□□□□□ -1.7
TPM4P67936 OR7E10P-201ENST00000526420 991 ntBASIC4.44□□□□□ -1.7
TPM4P67936 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.44□□□□□ -1.7
TPM4P67936 TRAV8-5-201ENST00000537369 341 ntBASIC4.44□□□□□ -1.7
TPM4P67936 AC092747.2-201ENST00000545069 983 ntBASIC4.44□□□□□ -1.7
TPM4P67936 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.44□□□□□ -1.7
TPM4P67936 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.44□□□□□ -1.7
TPM4P67936 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.44□□□□□ -1.7
TPM4P67936 AL133457.1-201ENST00000564251 987 ntBASIC4.44□□□□□ -1.7
TPM4P67936 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.44□□□□□ -1.7
TPM4P67936 SNX6P1-201ENST00000601728 1224 ntBASIC4.44□□□□□ -1.7
TPM4P67936 AC022960.2-201ENST00000616300 666 ntBASIC4.44□□□□□ -1.7
TPM4P67936 AC091953.3-201ENST00000623220 236 ntBASIC4.44□□□□□ -1.7
TPM4P67936 AP003400.2-201ENST00000624036 666 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms