Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
YBX1P67809 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
YBX1P67809 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
YBX1P67809 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
YBX1P67809 THAP12P9-201ENST00000503971 2360 ntBASIC5.66□□□□□ -1.5
YBX1P67809 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
YBX1P67809 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.66□□□□□ -1.5
YBX1P67809 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
YBX1P67809 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
YBX1P67809 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
YBX1P67809 AC006210.2-201ENST00000367074 1545 ntBASIC5.66□□□□□ -1.5
YBX1P67809 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.66□□□□□ -1.5
YBX1P67809 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
YBX1P67809 OR4K15-201ENST00000305051 1216 ntBASIC5.66□□□□□ -1.5
YBX1P67809 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
YBX1P67809 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
YBX1P67809 Y_RNA.89-201ENST00000363031 102 ntBASIC5.66□□□□□ -1.5
YBX1P67809 RNU4-73P-201ENST00000363164 141 ntBASIC5.66□□□□□ -1.5
YBX1P67809 RNU6-534P-201ENST00000364877 106 ntBASIC5.66□□□□□ -1.5
YBX1P67809 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.66□□□□□ -1.5
YBX1P67809 RNU6-1300P-201ENST00000391046 108 ntBASIC5.66□□□□□ -1.5
YBX1P67809 RPL23AP47-201ENST00000408017 460 ntBASIC5.66□□□□□ -1.5
YBX1P67809 AC068533.2-201ENST00000411872 306 ntBASIC5.66□□□□□ -1.5
YBX1P67809 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.66□□□□□ -1.5
YBX1P67809 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.66□□□□□ -1.5
YBX1P67809 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.66□□□□□ -1.5
YBX1P67809 KCTD9P3-201ENST00000434597 1169 ntBASIC5.66□□□□□ -1.5
YBX1P67809 MTCYBP45-201ENST00000435243 565 ntBASIC5.66□□□□□ -1.5
YBX1P67809 AC104850.1-201ENST00000435940 476 ntBASIC5.66□□□□□ -1.5
YBX1P67809 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.66□□□□□ -1.5
YBX1P67809 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
YBX1P67809 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.66□□□□□ -1.5
YBX1P67809 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC5.66□□□□□ -1.5
YBX1P67809 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC5.66□□□□□ -1.5
YBX1P67809 OR52A4P-201ENST00000472867 958 ntBASIC5.66□□□□□ -1.5
YBX1P67809 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.66□□□□□ -1.5
YBX1P67809 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.66□□□□□ -1.5
YBX1P67809 RN7SL57P-201ENST00000493687 290 ntBASIC5.66□□□□□ -1.5
YBX1P67809 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.66□□□□□ -1.5
YBX1P67809 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC5.66□□□□□ -1.5
YBX1P67809 SNX5P1-201ENST00000505757 1041 ntBASIC5.66□□□□□ -1.5
YBX1P67809 RPL7L1P13-201ENST00000511702 739 ntBASIC5.66□□□□□ -1.5
YBX1P67809 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.66□□□□□ -1.5
YBX1P67809 RNY4P37-201ENST00000516225 96 ntBASIC5.66□□□□□ -1.5
YBX1P67809 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.66□□□□□ -1.5
YBX1P67809 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.66□□□□□ -1.5
YBX1P67809 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.66□□□□□ -1.5
YBX1P67809 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.66□□□□□ -1.5
YBX1P67809 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.66□□□□□ -1.5
YBX1P67809 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.66□□□□□ -1.5
YBX1P67809 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.66□□□□□ -1.5
YBX1P67809 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.66□□□□□ -1.5
YBX1P67809 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.66□□□□□ -1.5
YBX1P67809 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.66□□□□□ -1.5
YBX1P67809 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.66□□□□□ -1.5
YBX1P67809 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.66□□□□□ -1.5
YBX1P67809 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.66□□□□□ -1.5
YBX1P67809 MIR6768-201ENST00000610734 72 ntBASIC5.66□□□□□ -1.5
YBX1P67809 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.66□□□□□ -1.5
YBX1P67809 AP003122.6-201ENST00000623831 495 ntBASIC5.66□□□□□ -1.5
YBX1P67809 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.66□□□□□ -1.5
YBX1P67809 AC112487.2-201ENST00000637950 304 ntBASIC5.66□□□□□ -1.5
YBX1P67809 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.66□□□□□ -1.5
YBX1P67809 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC5.66□□□□□ -1.5
YBX1P67809 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
YBX1P67809 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
YBX1P67809 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
YBX1P67809 DCAF13P1-201ENST00000495256 1330 ntBASIC5.66□□□□□ -1.5
YBX1P67809 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
YBX1P67809 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
YBX1P67809 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
YBX1P67809 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
YBX1P67809 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
YBX1P67809 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
YBX1P67809 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
YBX1P67809 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
YBX1P67809 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.65□□□□□ -1.5
YBX1P67809 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.65□□□□□ -1.5
YBX1P67809 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
YBX1P67809 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
YBX1P67809 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.65□□□□□ -1.5
YBX1P67809 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
YBX1P67809 AC003973.3-201ENST00000624863 2822 ntBASIC5.65□□□□□ -1.5
YBX1P67809 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
YBX1P67809 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
YBX1P67809 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.65□□□□□ -1.5
YBX1P67809 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
YBX1P67809 RNU6-433P-201ENST00000363216 104 ntBASIC5.65□□□□□ -1.5
YBX1P67809 RN7SKP69-201ENST00000365390 305 ntBASIC5.65□□□□□ -1.5
YBX1P67809 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
YBX1P67809 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
YBX1P67809 MIR16-1-201ENST00000385271 89 ntBASIC5.65□□□□□ -1.5
YBX1P67809 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
YBX1P67809 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.65□□□□□ -1.5
YBX1P67809 GSTA9P-201ENST00000406231 611 ntBASIC5.65□□□□□ -1.5
YBX1P67809 RNU2-22P-201ENST00000411266 212 ntBASIC5.65□□□□□ -1.5
YBX1P67809 BTF3L4P3-201ENST00000418879 476 ntBASIC5.65□□□□□ -1.5
YBX1P67809 SDCBPP3-201ENST00000419629 891 ntBASIC5.65□□□□□ -1.5
YBX1P67809 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC5.65□□□□□ -1.5
YBX1P67809 MTCO1P20-201ENST00000425366 358 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms