Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDN20P56880 CCDC58P3-201ENST00000590792 430 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 AC124856.1-201ENST00000600819 896 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 AC020910.3-201ENST00000603701 874 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 AL031320.1-201ENST00000604177 357 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 AC005084.1-201ENST00000605160 304 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 AP001521.2-201ENST00000608772 546 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 AL138478.1-201ENST00000612252 832 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 AC091953.3-201ENST00000623220 236 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 AP001784.1-201ENST00000624107 428 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 AC092608.3-201ENST00000625017 386 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.43□□□□□ -1.7
CLDN20P56880 AC090897.3-201ENST00000636973 1157 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CLDN20P56880 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CLDN20P56880 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN20P56880 LINC01109-201ENST00000603837 3081 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 SAMMSON-226ENST00000642089 1582 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN20P56880 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 AC104446.1-201ENST00000613728 1321 ntBASIC4.43□□□□□ -1.7
CLDN20P56880 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN20P56880 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN20P56880 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN20P56880 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN20P56880 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN20P56880 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN20P56880 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
CLDN20P56880 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CLDN20P56880 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CLDN20P56880 RN7SKP103-201ENST00000363848 320 ntBASIC4.42□□□□□ -1.7
CLDN20P56880 RNU6-304P-201ENST00000364855 107 ntBASIC4.42□□□□□ -1.7
CLDN20P56880 OR52E6-202ENST00000379946 954 ntBASIC4.42□□□□□ -1.7
CLDN20P56880 SNORD96B-201ENST00000386148 79 ntBASIC4.42□□□□□ -1.7
CLDN20P56880 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CLDN20P56880 AL357515.1-201ENST00000402967 542 ntBASIC4.42□□□□□ -1.7
CLDN20P56880 AL136310.1-201ENST00000404926 654 ntBASIC4.42□□□□□ -1.7
CLDN20P56880 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN20P56880 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.42□□□□□ -1.7
CLDN20P56880 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.42□□□□□ -1.7
CLDN20P56880 AC004690.1-201ENST00000418216 328 ntBASIC4.42□□□□□ -1.7
CLDN20P56880 AC027644.1-201ENST00000419595 298 ntBASIC4.42□□□□□ -1.7
CLDN20P56880 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN20P56880 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.42□□□□□ -1.7
CLDN20P56880 AC092447.3-201ENST00000426027 686 ntBASIC4.42□□□□□ -1.7
CLDN20P56880 NMNAT1P2-201ENST00000435192 860 ntBASIC4.42□□□□□ -1.7
CLDN20P56880 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN20P56880 CR769776.1-201ENST00000441254 787 ntBASIC4.42□□□□□ -1.7
CLDN20P56880 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN20P56880 FHP1-201ENST00000442741 703 ntBASIC4.42□□□□□ -1.7
CLDN20P56880 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN20P56880 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN20P56880 Z73417.1-201ENST00000447373 778 ntBASIC4.42□□□□□ -1.7
CLDN20P56880 AL591623.2-201ENST00000449978 222 ntBASIC4.42□□□□□ -1.7
CLDN20P56880 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.42□□□□□ -1.7
CLDN20P56880 METTL15P1-201ENST00000481421 1045 ntBASIC4.42□□□□□ -1.7
CLDN20P56880 AC005912.1-201ENST00000495392 255 ntBASIC4.42□□□□□ -1.7
CLDN20P56880 AC105233.1-201ENST00000498840 781 ntBASIC4.42□□□□□ -1.7
CLDN20P56880 MTND4LP2-201ENST00000502312 285 ntBASIC4.42□□□□□ -1.7
CLDN20P56880 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN20P56880 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN20P56880 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.42□□□□□ -1.7
CLDN20P56880 GAPDHP56-201ENST00000506031 988 ntBASIC4.42□□□□□ -1.7
CLDN20P56880 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN20P56880 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN20P56880 AC010285.3-201ENST00000511668 676 ntBASIC4.42□□□□□ -1.7
CLDN20P56880 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN20P56880 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN20P56880 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.42□□□□□ -1.7
CLDN20P56880 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.42□□□□□ -1.7
CLDN20P56880 AC138393.1-206ENST00000540997 1886 ntBASIC4.42□□□□□ -1.7
CLDN20P56880 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN20P56880 LRRC34P1-201ENST00000542742 915 ntBASIC4.42□□□□□ -1.7
CLDN20P56880 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.42□□□□□ -1.7
CLDN20P56880 AC116553.2-201ENST00000564203 463 ntBASIC4.42□□□□□ -1.7
CLDN20P56880 AC090312.2-201ENST00000582687 378 ntBASIC4.42□□□□□ -1.7
CLDN20P56880 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN20P56880 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN20P56880 AP001542.2-201ENST00000593141 364 ntBASIC4.42□□□□□ -1.7
CLDN20P56880 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN20P56880 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN20P56880 AC008536.1-201ENST00000602872 669 ntBASIC4.42□□□□□ -1.7
CLDN20P56880 AC104687.2-201ENST00000604442 342 ntBASIC4.42□□□□□ -1.7
CLDN20P56880 AC091979.2-201ENST00000607514 214 ntBASIC4.42□□□□□ -1.7
CLDN20P56880 AC009159.2-201ENST00000617603 606 ntBASIC4.42□□□□□ -1.7
CLDN20P56880 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN20P56880 AP000676.4-201ENST00000624659 623 ntBASIC4.42□□□□□ -1.7
CLDN20P56880 AC016717.3-201ENST00000624730 554 ntBASIC4.42□□□□□ -1.7
CLDN20P56880 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN20P56880 CASC19-206ENST00000641028 1430 ntBASIC4.42□□□□□ -1.7
CLDN20P56880 AL672167.1-205ENST00000641112 3080 ntBASIC4.42□□□□□ -1.7
CLDN20P56880 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.42□□□□□ -1.7
CLDN20P56880 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
CLDN20P56880 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.42□□□□□ -1.7
CLDN20P56880 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN20P56880 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CLDN20P56880 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN20P56880 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN20P56880 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CLDN20P56880 AC107068.1-201ENST00000563286 4218 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 185.1 ms