Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 ABCC13-202ENST00000463099 3842 ntBASIC4.94□□□□□ -1.62
SUMO3P55854 AC092754.1-201ENST00000472975 479 ntBASIC4.94□□□□□ -1.62
SUMO3P55854 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.94□□□□□ -1.62
SUMO3P55854 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.94□□□□□ -1.62
SUMO3P55854 AC092045.1-201ENST00000495716 1231 ntBASIC4.94□□□□□ -1.62
SUMO3P55854 AL136038.1-201ENST00000497246 351 ntBASIC4.94□□□□□ -1.62
SUMO3P55854 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.94□□□□□ -1.62
SUMO3P55854 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.94□□□□□ -1.62
SUMO3P55854 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.94□□□□□ -1.62
SUMO3P55854 AC018797.3-201ENST00000513388 1241 ntBASIC4.94□□□□□ -1.62
SUMO3P55854 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.94□□□□□ -1.62
SUMO3P55854 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.94□□□□□ -1.62
SUMO3P55854 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.94□□□□□ -1.62
SUMO3P55854 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.94□□□□□ -1.62
SUMO3P55854 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.94□□□□□ -1.62
SUMO3P55854 OR4A43P-201ENST00000532938 908 ntBASIC4.94□□□□□ -1.62
SUMO3P55854 MIR4716-201ENST00000579628 84 ntBASIC4.94□□□□□ -1.62
SUMO3P55854 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.94□□□□□ -1.62
SUMO3P55854 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.94□□□□□ -1.62
SUMO3P55854 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.94□□□□□ -1.62
SUMO3P55854 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.94□□□□□ -1.62
SUMO3P55854 AC000068.2-201ENST00000608816 460 ntBASIC4.94□□□□□ -1.62
SUMO3P55854 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.94□□□□□ -1.62
SUMO3P55854 AC010632.3-201ENST00000611377 369 ntBASIC4.94□□□□□ -1.62
SUMO3P55854 AC011939.3-201ENST00000613686 466 ntBASIC4.94□□□□□ -1.62
SUMO3P55854 AC008083.4-201ENST00000615076 444 ntBASIC4.94□□□□□ -1.62
SUMO3P55854 AC015908.5-201ENST00000623289 343 ntBASIC4.94□□□□□ -1.62
SUMO3P55854 AC091965.5-201ENST00000624785 342 ntBASIC4.94□□□□□ -1.62
SUMO3P55854 AC092184.1-201ENST00000625042 715 ntBASIC4.94□□□□□ -1.62
SUMO3P55854 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.94□□□□□ -1.62
SUMO3P55854 PCMTD1P7-201ENST00000634506 357 ntBASIC4.94□□□□□ -1.62
SUMO3P55854 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.94□□□□□ -1.62
SUMO3P55854 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SUMO3P55854 AC010266.2-201ENST00000564741 3255 ntBASIC4.94□□□□□ -1.62
SUMO3P55854 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SUMO3P55854 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SUMO3P55854 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
SUMO3P55854 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SUMO3P55854 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.94□□□□□ -1.62
SUMO3P55854 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SUMO3P55854 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
SUMO3P55854 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SUMO3P55854 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SUMO3P55854 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SUMO3P55854 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SUMO3P55854 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
SUMO3P55854 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SUMO3P55854 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
SUMO3P55854 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SUMO3P55854 RNU1-149P-201ENST00000390870 161 ntBASIC4.93□□□□□ -1.62
SUMO3P55854 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SUMO3P55854 RPL23AP29-201ENST00000397284 453 ntBASIC4.93□□□□□ -1.62
SUMO3P55854 CYCSP45-201ENST00000402289 315 ntBASIC4.93□□□□□ -1.62
SUMO3P55854 AC004022.2-201ENST00000413824 193 ntBASIC4.93□□□□□ -1.62
SUMO3P55854 MTCYBP38-201ENST00000417160 1123 ntBASIC4.93□□□□□ -1.62
SUMO3P55854 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.93□□□□□ -1.62
SUMO3P55854 AL590609.2-201ENST00000421430 368 ntBASIC4.93□□□□□ -1.62
SUMO3P55854 MRPS21P2-201ENST00000424704 264 ntBASIC4.93□□□□□ -1.62
SUMO3P55854 AL158073.1-201ENST00000426848 1104 ntBASIC4.93□□□□□ -1.62
SUMO3P55854 RPL36P19-201ENST00000430744 301 ntBASIC4.93□□□□□ -1.62
SUMO3P55854 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.93□□□□□ -1.62
SUMO3P55854 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.93□□□□□ -1.62
SUMO3P55854 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.93□□□□□ -1.62
SUMO3P55854 USP9YP10-201ENST00000454868 628 ntBASIC4.93□□□□□ -1.62
SUMO3P55854 AC079168.1-201ENST00000458741 345 ntBASIC4.93□□□□□ -1.62
SUMO3P55854 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.93□□□□□ -1.62
SUMO3P55854 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.93□□□□□ -1.62
SUMO3P55854 AC104109.1-201ENST00000498563 436 ntBASIC4.93□□□□□ -1.62
SUMO3P55854 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.93□□□□□ -1.62
SUMO3P55854 AC108078.3-201ENST00000502633 489 ntBASIC4.93□□□□□ -1.62
SUMO3P55854 LTV1P1-201ENST00000510683 1237 ntBASIC4.93□□□□□ -1.62
SUMO3P55854 USP9YP5-201ENST00000511770 630 ntBASIC4.93□□□□□ -1.62
SUMO3P55854 SCARNA20.4-201ENST00000516969 131 ntBASIC4.93□□□□□ -1.62
SUMO3P55854 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.93□□□□□ -1.62
SUMO3P55854 AC022360.1-201ENST00000521058 340 ntBASIC4.93□□□□□ -1.62
SUMO3P55854 OR7K1P-201ENST00000546439 926 ntBASIC4.93□□□□□ -1.62
SUMO3P55854 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SUMO3P55854 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
SUMO3P55854 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.93□□□□□ -1.62
SUMO3P55854 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.93□□□□□ -1.62
SUMO3P55854 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.93□□□□□ -1.62
SUMO3P55854 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.93□□□□□ -1.62
SUMO3P55854 HSPE1P14-201ENST00000605812 302 ntBASIC4.93□□□□□ -1.62
SUMO3P55854 AC135507.1-201ENST00000607214 561 ntBASIC4.93□□□□□ -1.62
SUMO3P55854 RNA5SP439-201ENST00000617595 124 ntBASIC4.93□□□□□ -1.62
SUMO3P55854 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.93□□□□□ -1.62
SUMO3P55854 AC127502.3-201ENST00000636170 1206 ntBASIC4.93□□□□□ -1.62
SUMO3P55854 AC074101.1-201ENST00000637861 241 ntBASIC4.93□□□□□ -1.62
SUMO3P55854 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SUMO3P55854 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SUMO3P55854 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC4.93□□□□□ -1.62
SUMO3P55854 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.93□□□□□ -1.62
SUMO3P55854 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.93□□□□□ -1.62
SUMO3P55854 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SUMO3P55854 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.93□□□□□ -1.62
SUMO3P55854 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SUMO3P55854 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
SUMO3P55854 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SUMO3P55854 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.92□□□□□ -1.62
SUMO3P55854 AC006210.2-201ENST00000367074 1545 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms