Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH6P55285 AC114546.3-201ENST00000623582 1734 ntBASIC4.31□□□□□ -1.72
CDH6P55285 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDH6P55285 ZNF962P-201ENST00000443465 3140 ntBASIC4.3□□□□□ -1.72
CDH6P55285 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.3□□□□□ -1.72
CDH6P55285 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.3□□□□□ -1.72
CDH6P55285 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDH6P55285 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDH6P55285 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.3□□□□□ -1.72
CDH6P55285 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDH6P55285 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.3□□□□□ -1.72
CDH6P55285 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.3□□□□□ -1.72
CDH6P55285 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CDH6P55285 USP9YP4-201ENST00000424401 1745 ntBASIC4.3□□□□□ -1.72
CDH6P55285 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CDH6P55285 RNA5SP502-201ENST00000362694 119 ntBASIC4.3□□□□□ -1.72
CDH6P55285 RHOT1P2-201ENST00000366423 333 ntBASIC4.3□□□□□ -1.72
CDH6P55285 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CDH6P55285 RNU6-146P-201ENST00000384602 108 ntBASIC4.3□□□□□ -1.72
CDH6P55285 RPL23AP26-201ENST00000412728 464 ntBASIC4.3□□□□□ -1.72
CDH6P55285 PGBD4P8-201ENST00000412993 562 ntBASIC4.3□□□□□ -1.72
CDH6P55285 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.3□□□□□ -1.72
CDH6P55285 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.3□□□□□ -1.72
CDH6P55285 COX6B1P7-201ENST00000430845 235 ntBASIC4.3□□□□□ -1.72
CDH6P55285 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.3□□□□□ -1.72
CDH6P55285 ELOCP18-201ENST00000434209 337 ntBASIC4.3□□□□□ -1.72
CDH6P55285 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.3□□□□□ -1.72
CDH6P55285 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.3□□□□□ -1.72
CDH6P55285 AC073143.1-201ENST00000436316 395 ntBASIC4.3□□□□□ -1.72
CDH6P55285 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.3□□□□□ -1.72
CDH6P55285 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.3□□□□□ -1.72
CDH6P55285 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.3□□□□□ -1.72
CDH6P55285 RPL36AP13-201ENST00000457490 317 ntBASIC4.3□□□□□ -1.72
CDH6P55285 PPIAP21-201ENST00000464473 501 ntBASIC4.3□□□□□ -1.72
CDH6P55285 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.3□□□□□ -1.72
CDH6P55285 AC091167.1-201ENST00000492017 396 ntBASIC4.3□□□□□ -1.72
CDH6P55285 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.3□□□□□ -1.72
CDH6P55285 AC093824.1-201ENST00000508796 343 ntBASIC4.3□□□□□ -1.72
CDH6P55285 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.3□□□□□ -1.72
CDH6P55285 AC034244.2-201ENST00000514668 858 ntBASIC4.3□□□□□ -1.72
CDH6P55285 AC099522.1-202ENST00000514718 367 ntBASIC4.3□□□□□ -1.72
CDH6P55285 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDH6P55285 RNU6-347P-201ENST00000516658 105 ntBASIC4.3□□□□□ -1.72
CDH6P55285 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.3□□□□□ -1.72
CDH6P55285 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDH6P55285 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.3□□□□□ -1.72
CDH6P55285 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CDH6P55285 IPO5P1-202ENST00000600039 287 ntBASIC4.3□□□□□ -1.72
CDH6P55285 AC090953.1-201ENST00000604305 1092 ntBASIC4.3□□□□□ -1.72
CDH6P55285 AL139286.1-201ENST00000604465 483 ntBASIC4.3□□□□□ -1.72
CDH6P55285 AL023583.1-201ENST00000607518 1143 ntBASIC4.3□□□□□ -1.72
CDH6P55285 MIR6748-201ENST00000610433 71 ntBASIC4.3□□□□□ -1.72
CDH6P55285 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDH6P55285 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CDH6P55285 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.3□□□□□ -1.72
CDH6P55285 AC019080.5-201ENST00000624891 757 ntBASIC4.3□□□□□ -1.72
CDH6P55285 AP005264.7-201ENST00000625003 745 ntBASIC4.3□□□□□ -1.72
CDH6P55285 MIR3653-201ENST00000625572 110 ntBASIC4.3□□□□□ -1.72
CDH6P55285 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.3□□□□□ -1.72
CDH6P55285 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDH6P55285 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDH6P55285 ERCC6-202ENST00000374127 1782 ntBASIC4.3□□□□□ -1.72
CDH6P55285 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDH6P55285 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CDH6P55285 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.29□□□□□ -1.72
CDH6P55285 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CDH6P55285 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH6P55285 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CDH6P55285 MIR383-201ENST00000362257 73 ntBASIC4.29□□□□□ -1.72
CDH6P55285 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.29□□□□□ -1.72
CDH6P55285 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.29□□□□□ -1.72
CDH6P55285 DPY19L1P2-201ENST00000426647 915 ntBASIC4.29□□□□□ -1.72
CDH6P55285 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH6P55285 BTF3P10-201ENST00000433415 495 ntBASIC4.29□□□□□ -1.72
CDH6P55285 Z85994.2-201ENST00000434327 452 ntBASIC4.29□□□□□ -1.72
CDH6P55285 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH6P55285 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.29□□□□□ -1.72
CDH6P55285 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH6P55285 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH6P55285 RNA5SP246-201ENST00000458909 119 ntBASIC4.29□□□□□ -1.72
CDH6P55285 UQCRHP4-201ENST00000471686 272 ntBASIC4.29□□□□□ -1.72
CDH6P55285 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.29□□□□□ -1.72
CDH6P55285 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.29□□□□□ -1.72
CDH6P55285 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.29□□□□□ -1.72
CDH6P55285 RPL23AP87-202ENST00000573039 466 ntBASIC4.29□□□□□ -1.72
CDH6P55285 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CDH6P55285 PSMA6P4-201ENST00000603247 718 ntBASIC4.29□□□□□ -1.72
CDH6P55285 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.29□□□□□ -1.72
CDH6P55285 AC007390.2-201ENST00000606229 3803 ntBASIC4.29□□□□□ -1.72
CDH6P55285 AC005021.1-201ENST00000608730 355 ntBASIC4.29□□□□□ -1.72
CDH6P55285 AC015813.4-201ENST00000610469 179 ntBASIC4.29□□□□□ -1.72
CDH6P55285 AC090246.1-201ENST00000616499 426 ntBASIC4.29□□□□□ -1.72
CDH6P55285 AC095038.2-201ENST00000621464 1070 ntBASIC4.29□□□□□ -1.72
CDH6P55285 AL356121.2-201ENST00000624715 780 ntBASIC4.29□□□□□ -1.72
CDH6P55285 AC119674.1-212ENST00000641155 993 ntBASIC4.29□□□□□ -1.72
CDH6P55285 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDH6P55285 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CDH6P55285 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CDH6P55285 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDH6P55285 KPNA2P2-201ENST00000419546 1489 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms