Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDH4P55283 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDH4P55283 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.34□□□□□ -1.71
CDH4P55283 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.72
CDH4P55283 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CDH4P55283 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDH4P55283 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDH4P55283 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDH4P55283 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
CDH4P55283 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
CDH4P55283 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDH4P55283 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDH4P55283 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.33□□□□□ -1.72
CDH4P55283 MTND4P26-201ENST00000415971 1359 ntBASIC4.33□□□□□ -1.72
CDH4P55283 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.33□□□□□ -1.72
CDH4P55283 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.33□□□□□ -1.72
CDH4P55283 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CDH4P55283 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDH4P55283 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDH4P55283 MIR421-201ENST00000365696 85 ntBASIC4.33□□□□□ -1.72
CDH4P55283 SNORA70C-201ENST00000384538 135 ntBASIC4.33□□□□□ -1.72
CDH4P55283 MIR7-1-201ENST00000384871 110 ntBASIC4.33□□□□□ -1.72
CDH4P55283 LAP3P1-201ENST00000403648 294 ntBASIC4.33□□□□□ -1.72
CDH4P55283 RPL23AP48-201ENST00000406913 488 ntBASIC4.33□□□□□ -1.72
CDH4P55283 DHFRP5-201ENST00000406944 564 ntBASIC4.33□□□□□ -1.72
CDH4P55283 VN1R8P-201ENST00000407739 893 ntBASIC4.33□□□□□ -1.72
CDH4P55283 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDH4P55283 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDH4P55283 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.33□□□□□ -1.72
CDH4P55283 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.33□□□□□ -1.72
CDH4P55283 COX6CP15-201ENST00000426313 211 ntBASIC4.33□□□□□ -1.72
CDH4P55283 AL627224.1-201ENST00000448334 444 ntBASIC4.33□□□□□ -1.72
CDH4P55283 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDH4P55283 AC005229.2-201ENST00000456995 399 ntBASIC4.33□□□□□ -1.72
CDH4P55283 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.33□□□□□ -1.72
CDH4P55283 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.33□□□□□ -1.72
CDH4P55283 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
CDH4P55283 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.33□□□□□ -1.72
CDH4P55283 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.33□□□□□ -1.72
CDH4P55283 SMARCE1P4-201ENST00000523647 241 ntBASIC4.33□□□□□ -1.72
CDH4P55283 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.33□□□□□ -1.72
CDH4P55283 AC025884.1-201ENST00000556034 378 ntBASIC4.33□□□□□ -1.72
CDH4P55283 SS18L2P2-201ENST00000583960 235 ntBASIC4.33□□□□□ -1.72
CDH4P55283 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.33□□□□□ -1.72
CDH4P55283 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.33□□□□□ -1.72
CDH4P55283 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.33□□□□□ -1.72
CDH4P55283 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDH4P55283 BNIP3P7-201ENST00000605641 516 ntBASIC4.33□□□□□ -1.72
CDH4P55283 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.33□□□□□ -1.72
CDH4P55283 AC023043.4-201ENST00000612081 449 ntBASIC4.33□□□□□ -1.72
CDH4P55283 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.33□□□□□ -1.72
CDH4P55283 AC016957.2-201ENST00000616998 848 ntBASIC4.33□□□□□ -1.72
CDH4P55283 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.33□□□□□ -1.72
CDH4P55283 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDH4P55283 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDH4P55283 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDH4P55283 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDH4P55283 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDH4P55283 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.33□□□□□ -1.72
CDH4P55283 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.32□□□□□ -1.72
CDH4P55283 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.32□□□□□ -1.72
CDH4P55283 CYP1D1P-201ENST00000416662 1433 ntBASIC4.32□□□□□ -1.72
CDH4P55283 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CDH4P55283 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDH4P55283 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDH4P55283 RNU6-152P-201ENST00000384037 107 ntBASIC4.32□□□□□ -1.72
CDH4P55283 RPS26P8-201ENST00000393490 348 ntBASIC4.32□□□□□ -1.72
CDH4P55283 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDH4P55283 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDH4P55283 RPS23P10-201ENST00000416185 486 ntBASIC4.32□□□□□ -1.72
CDH4P55283 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.32□□□□□ -1.72
CDH4P55283 AL356806.1-201ENST00000422524 916 ntBASIC4.32□□□□□ -1.72
CDH4P55283 PRELID3BP10-201ENST00000431957 584 ntBASIC4.32□□□□□ -1.72
CDH4P55283 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.32□□□□□ -1.72
CDH4P55283 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.32□□□□□ -1.72
CDH4P55283 Z99127.2-201ENST00000441426 334 ntBASIC4.32□□□□□ -1.72
CDH4P55283 AL606490.8-201ENST00000441624 319 ntBASIC4.32□□□□□ -1.72
CDH4P55283 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.32□□□□□ -1.72
CDH4P55283 AL121877.1-201ENST00000453704 622 ntBASIC4.32□□□□□ -1.72
CDH4P55283 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.32□□□□□ -1.72
CDH4P55283 RNA5SP246-201ENST00000458909 119 ntBASIC4.32□□□□□ -1.72
CDH4P55283 RPL7P19-201ENST00000469948 618 ntBASIC4.32□□□□□ -1.72
CDH4P55283 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
CDH4P55283 AC021146.3-201ENST00000511911 260 ntBASIC4.32□□□□□ -1.72
CDH4P55283 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.32□□□□□ -1.72
CDH4P55283 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDH4P55283 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.32□□□□□ -1.72
CDH4P55283 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDH4P55283 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.32□□□□□ -1.72
CDH4P55283 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.32□□□□□ -1.72
CDH4P55283 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.32□□□□□ -1.72
CDH4P55283 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.32□□□□□ -1.72
CDH4P55283 AC022387.2-201ENST00000604050 448 ntBASIC4.32□□□□□ -1.72
CDH4P55283 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.32□□□□□ -1.72
CDH4P55283 AC023509.5-201ENST00000617434 807 ntBASIC4.32□□□□□ -1.72
CDH4P55283 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.32□□□□□ -1.72
CDH4P55283 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.32□□□□□ -1.72
CDH4P55283 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDH4P55283 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CDH4P55283 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms