Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.74□□□□□ -1.65
NUP98P52948 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.74□□□□□ -1.65
NUP98P52948 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.74□□□□□ -1.65
NUP98P52948 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.74□□□□□ -1.65
NUP98P52948 OR4A12P-201ENST00000530847 918 ntBASIC4.74□□□□□ -1.65
NUP98P52948 AC007458.1-201ENST00000542812 373 ntBASIC4.74□□□□□ -1.65
NUP98P52948 AC016590.3-201ENST00000611171 753 ntBASIC4.74□□□□□ -1.65
NUP98P52948 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.74□□□□□ -1.65
NUP98P52948 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
NUP98P52948 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
NUP98P52948 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
NUP98P52948 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.73□□□□□ -1.65
NUP98P52948 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.73□□□□□ -1.65
NUP98P52948 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.73□□□□□ -1.65
NUP98P52948 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NUP98P52948 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NUP98P52948 SNORD9-201ENST00000362566 104 ntBASIC4.73□□□□□ -1.65
NUP98P52948 SNORA11.1-201ENST00000408133 129 ntBASIC4.73□□□□□ -1.65
NUP98P52948 HLA-N-201ENST00000437516 135 ntBASIC4.73□□□□□ -1.65
NUP98P52948 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.73□□□□□ -1.65
NUP98P52948 AC107016.1-201ENST00000550463 337 ntBASIC4.73□□□□□ -1.65
NUP98P52948 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NUP98P52948 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.73□□□□□ -1.65
NUP98P52948 DDX18P4-201ENST00000511690 1966 ntBASIC4.73□□□□□ -1.65
NUP98P52948 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.73□□□□□ -1.65
NUP98P52948 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NUP98P52948 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
NUP98P52948 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NUP98P52948 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NUP98P52948 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.72□□□□□ -1.65
NUP98P52948 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NUP98P52948 RNA5SP146-201ENST00000410743 123 ntBASIC4.72□□□□□ -1.65
NUP98P52948 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.72□□□□□ -1.65
NUP98P52948 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.72□□□□□ -1.65
NUP98P52948 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.72□□□□□ -1.65
NUP98P52948 RN7SL271P-201ENST00000487601 295 ntBASIC4.72□□□□□ -1.65
NUP98P52948 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.72□□□□□ -1.65
NUP98P52948 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.72□□□□□ -1.65
NUP98P52948 HMGN1P11-201ENST00000508668 303 ntBASIC4.72□□□□□ -1.65
NUP98P52948 AC109635.6-201ENST00000525487 1113 ntBASIC4.72□□□□□ -1.65
NUP98P52948 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.72□□□□□ -1.65
NUP98P52948 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.72□□□□□ -1.65
NUP98P52948 AC244258.1-201ENST00000637553 1071 ntBASIC4.72□□□□□ -1.65
NUP98P52948 AL392088.2-201ENST00000637607 285 ntBASIC4.72□□□□□ -1.65
NUP98P52948 AC007823.1-201ENST00000569932 1566 ntBASIC4.72□□□□□ -1.65
NUP98P52948 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NUP98P52948 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NUP98P52948 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.72□□□□□ -1.65
NUP98P52948 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.72□□□□□ -1.65
NUP98P52948 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.72□□□□□ -1.65
NUP98P52948 PRO1804-201ENST00000623780 2050 ntBASIC4.72□□□□□ -1.65
NUP98P52948 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.72□□□□□ -1.65
NUP98P52948 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
NUP98P52948 IL6STP1-201ENST00000346911 1020 ntBASIC4.72□□□□□ -1.65
NUP98P52948 RPS7P15-201ENST00000415804 584 ntBASIC4.72□□□□□ -1.65
NUP98P52948 CYCSP4-201ENST00000429682 331 ntBASIC4.72□□□□□ -1.65
NUP98P52948 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.72□□□□□ -1.65
NUP98P52948 PRDX3P3-201ENST00000447765 522 ntBASIC4.72□□□□□ -1.65
NUP98P52948 AC007967.1-201ENST00000455422 1159 ntBASIC4.72□□□□□ -1.65
NUP98P52948 RN7SL585P-201ENST00000470538 280 ntBASIC4.72□□□□□ -1.65
NUP98P52948 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.72□□□□□ -1.65
NUP98P52948 AC017037.1-201ENST00000508460 471 ntBASIC4.72□□□□□ -1.65
NUP98P52948 OR5B10P-201ENST00000532869 642 ntBASIC4.72□□□□□ -1.65
NUP98P52948 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.72□□□□□ -1.65
NUP98P52948 TRAV15-201ENST00000556680 249 ntBASIC4.72□□□□□ -1.65
NUP98P52948 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.72□□□□□ -1.65
NUP98P52948 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
NUP98P52948 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NUP98P52948 AP001284.1-201ENST00000528393 2118 ntBASIC4.71□□□□□ -1.66
NUP98P52948 MFSD8-236ENST00000641509 4050 ntBASIC4.71□□□□□ -1.66
NUP98P52948 UBE3AP2-201ENST00000429033 2259 ntBASIC4.71□□□□□ -1.66
NUP98P52948 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.71□□□□□ -1.66
NUP98P52948 GSTM3P2-201ENST00000412746 530 ntBASIC4.71□□□□□ -1.66
NUP98P52948 AC010740.1-201ENST00000417035 684 ntBASIC4.71□□□□□ -1.66
NUP98P52948 AC115115.1-201ENST00000449927 248 ntBASIC4.71□□□□□ -1.66
NUP98P52948 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.71□□□□□ -1.66
NUP98P52948 AC108941.1-201ENST00000502853 530 ntBASIC4.71□□□□□ -1.66
NUP98P52948 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.71□□□□□ -1.66
NUP98P52948 DSTNP2-201ENST00000504533 515 ntBASIC4.71□□□□□ -1.66
NUP98P52948 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.71□□□□□ -1.66
NUP98P52948 AL139089.1-201ENST00000620372 975 ntBASIC4.71□□□□□ -1.66
NUP98P52948 AC008079.2-201ENST00000623543 20396 ntBASIC4.71□□□□□ -1.66
NUP98P52948 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.71□□□□□ -1.66
NUP98P52948 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.71□□□□□ -1.66
NUP98P52948 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.71□□□□□ -1.66
NUP98P52948 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
NUP98P52948 AL355596.1-201ENST00000565399 3996 ntBASIC4.71□□□□□ -1.66
NUP98P52948 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.71□□□□□ -1.66
NUP98P52948 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
NUP98P52948 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NUP98P52948 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NUP98P52948 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.7□□□□□ -1.66
NUP98P52948 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
NUP98P52948 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.7□□□□□ -1.66
NUP98P52948 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
NUP98P52948 OR6K3-202ENST00000368146 996 ntBASIC4.7□□□□□ -1.66
NUP98P52948 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.7□□□□□ -1.66
NUP98P52948 HDGFP1-201ENST00000405943 252 ntBASIC4.7□□□□□ -1.66
NUP98P52948 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.7□□□□□ -1.66
NUP98P52948 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms