Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AL590229.1-201ENST00000603497 542 ntBASIC6.01□□□□□ -1.45
MRE11P49959 AC104073.3-201ENST00000610942 955 ntBASIC6.01□□□□□ -1.45
MRE11P49959 AC009163.6-201ENST00000612367 342 ntBASIC6.01□□□□□ -1.45
MRE11P49959 Z69908.1-201ENST00000622603 247 ntBASIC6.01□□□□□ -1.45
MRE11P49959 AC079248.2-201ENST00000623779 326 ntBASIC6.01□□□□□ -1.45
MRE11P49959 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
MRE11P49959 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
MRE11P49959 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.01□□□□□ -1.45
MRE11P49959 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
MRE11P49959 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
MRE11P49959 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC6.01□□□□□ -1.45
MRE11P49959 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
MRE11P49959 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
MRE11P49959 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
MRE11P49959 AC093775.1-201ENST00000624154 1868 ntBASIC6□□□□□ -1.45
MRE11P49959 DDX18P4-201ENST00000511690 1966 ntBASIC6□□□□□ -1.45
MRE11P49959 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
MRE11P49959 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6□□□□□ -1.45
MRE11P49959 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6□□□□□ -1.45
MRE11P49959 AL606537.1-201ENST00000607258 2011 ntBASIC6□□□□□ -1.45
MRE11P49959 Y_RNA.126-201ENST00000363382 111 ntBASIC6□□□□□ -1.45
MRE11P49959 RNA5SP223-201ENST00000365174 120 ntBASIC6□□□□□ -1.45
MRE11P49959 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6□□□□□ -1.45
MRE11P49959 AL672167.2-201ENST00000377164 879 ntBASIC6□□□□□ -1.45
MRE11P49959 MIR192-201ENST00000384915 110 ntBASIC6□□□□□ -1.45
MRE11P49959 RNU6-1320P-201ENST00000390838 107 ntBASIC6□□□□□ -1.45
MRE11P49959 RNU6-1269P-201ENST00000391139 107 ntBASIC6□□□□□ -1.45
MRE11P49959 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC6□□□□□ -1.45
MRE11P49959 ERHP2-201ENST00000402323 299 ntBASIC6□□□□□ -1.45
MRE11P49959 RPS4XP9-201ENST00000405151 780 ntBASIC6□□□□□ -1.45
MRE11P49959 U3.32-201ENST00000408116 212 ntBASIC6□□□□□ -1.45
MRE11P49959 RNU4-74P-201ENST00000411280 161 ntBASIC6□□□□□ -1.45
MRE11P49959 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC6□□□□□ -1.45
MRE11P49959 AC009237.10-201ENST00000414112 510 ntBASIC6□□□□□ -1.45
MRE11P49959 AC009237.5-201ENST00000414271 501 ntBASIC6□□□□□ -1.45
MRE11P49959 AK4P4-201ENST00000419465 646 ntBASIC6□□□□□ -1.45
MRE11P49959 E2F6P2-201ENST00000420708 748 ntBASIC6□□□□□ -1.45
MRE11P49959 AC006335.2-201ENST00000437993 330 ntBASIC6□□□□□ -1.45
MRE11P49959 AC009961.3-201ENST00000449832 765 ntBASIC6□□□□□ -1.45
MRE11P49959 AC233982.1-201ENST00000451247 436 ntBASIC6□□□□□ -1.45
MRE11P49959 ANKRD26P4-201ENST00000455755 950 ntBASIC6□□□□□ -1.45
MRE11P49959 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC6□□□□□ -1.45
MRE11P49959 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC6□□□□□ -1.45
MRE11P49959 RNU6-599P-201ENST00000459383 107 ntBASIC6□□□□□ -1.45
MRE11P49959 RNU6-1193P-201ENST00000459461 107 ntBASIC6□□□□□ -1.45
MRE11P49959 RPS18P6-201ENST00000476880 458 ntBASIC6□□□□□ -1.45
MRE11P49959 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6□□□□□ -1.45
MRE11P49959 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6□□□□□ -1.45
MRE11P49959 PTK2-220ENST00000520151 573 ntTSL 4 BASIC6□□□□□ -1.45
MRE11P49959 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6□□□□□ -1.45
MRE11P49959 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC6□□□□□ -1.45
MRE11P49959 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC6□□□□□ -1.45
MRE11P49959 AC105233.3-201ENST00000531125 744 ntBASIC6□□□□□ -1.45
MRE11P49959 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC6□□□□□ -1.45
MRE11P49959 AC022662.1-201ENST00000580252 331 ntBASIC6□□□□□ -1.45
MRE11P49959 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6□□□□□ -1.45
MRE11P49959 AC022069.1-201ENST00000582910 658 ntBASIC6□□□□□ -1.45
MRE11P49959 AC008745.1-201ENST00000604064 271 ntBASIC6□□□□□ -1.45
MRE11P49959 AL121890.3-201ENST00000618494 516 ntBASIC6□□□□□ -1.45
MRE11P49959 RNU6-368P-201ENST00000620928 107 ntBASIC6□□□□□ -1.45
MRE11P49959 RNU6-538P-201ENST00000622329 107 ntBASIC6□□□□□ -1.45
MRE11P49959 AC010608.2-201ENST00000624830 470 ntBASIC6□□□□□ -1.45
MRE11P49959 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
MRE11P49959 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
MRE11P49959 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC6□□□□□ -1.45
MRE11P49959 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
MRE11P49959 AL353796.1-201ENST00000561542 3241 ntBASIC6□□□□□ -1.45
MRE11P49959 AC027228.2-201ENST00000567141 2154 ntBASIC6□□□□□ -1.45
MRE11P49959 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
MRE11P49959 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.99□□□□□ -1.45
MRE11P49959 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.99□□□□□ -1.45
MRE11P49959 SNORA48.7-201ENST00000391302 135 ntBASIC5.99□□□□□ -1.45
MRE11P49959 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.99□□□□□ -1.45
MRE11P49959 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.99□□□□□ -1.45
MRE11P49959 MTCO1P21-201ENST00000416634 589 ntBASIC5.99□□□□□ -1.45
MRE11P49959 TMBIM7P-201ENST00000418074 855 ntBASIC5.99□□□□□ -1.45
MRE11P49959 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.99□□□□□ -1.45
MRE11P49959 AC098826.1-201ENST00000433943 471 ntBASIC5.99□□□□□ -1.45
MRE11P49959 COX7BP2-201ENST00000437976 242 ntBASIC5.99□□□□□ -1.45
MRE11P49959 MTCYBP42-201ENST00000444653 1130 ntBASIC5.99□□□□□ -1.45
MRE11P49959 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC5.99□□□□□ -1.45
MRE11P49959 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.99□□□□□ -1.45
MRE11P49959 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.99□□□□□ -1.45
MRE11P49959 AC108751.2-201ENST00000469993 231 ntBASIC5.99□□□□□ -1.45
MRE11P49959 OR11I1P-201ENST00000486033 954 ntBASIC5.99□□□□□ -1.45
MRE11P49959 AC020890.1-201ENST00000491837 504 ntBASIC5.99□□□□□ -1.45
MRE11P49959 AC080014.1-201ENST00000496877 1201 ntBASIC5.99□□□□□ -1.45
MRE11P49959 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.99□□□□□ -1.45
MRE11P49959 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.99□□□□□ -1.45
MRE11P49959 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC5.99□□□□□ -1.45
MRE11P49959 PGAM1P13-201ENST00000507497 754 ntBASIC5.99□□□□□ -1.45
MRE11P49959 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.99□□□□□ -1.45
MRE11P49959 MTND3P5-201ENST00000512798 333 ntBASIC5.99□□□□□ -1.45
MRE11P49959 NDUFB4P12-201ENST00000513465 390 ntBASIC5.99□□□□□ -1.45
MRE11P49959 MTCO2P32-201ENST00000514865 403 ntBASIC5.99□□□□□ -1.45
MRE11P49959 RNU6-615P-201ENST00000516065 106 ntBASIC5.99□□□□□ -1.45
MRE11P49959 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.99□□□□□ -1.45
MRE11P49959 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.99□□□□□ -1.45
MRE11P49959 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.99□□□□□ -1.45
MRE11P49959 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms