Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.48□□□□□ -1.69
BRCC3P46736 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.48□□□□□ -1.69
BRCC3P46736 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.48□□□□□ -1.69
BRCC3P46736 RNU6-760P-201ENST00000516078 97 ntBASIC4.48□□□□□ -1.69
BRCC3P46736 OR4V1P-201ENST00000525394 1140 ntBASIC4.48□□□□□ -1.69
BRCC3P46736 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
BRCC3P46736 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
BRCC3P46736 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.48□□□□□ -1.69
BRCC3P46736 AGGF1P6-201ENST00000569213 976 ntBASIC4.48□□□□□ -1.69
BRCC3P46736 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.48□□□□□ -1.69
BRCC3P46736 MIR1254-2-201ENST00000579553 63 ntBASIC4.48□□□□□ -1.69
BRCC3P46736 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.48□□□□□ -1.69
BRCC3P46736 AC022916.3-201ENST00000592961 742 ntBASIC4.48□□□□□ -1.69
BRCC3P46736 MIMT1-201ENST00000597105 1050 ntBASIC4.48□□□□□ -1.69
BRCC3P46736 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.48□□□□□ -1.69
BRCC3P46736 AC133552.5-201ENST00000604266 540 ntBASIC4.48□□□□□ -1.69
BRCC3P46736 RNU4-89P-201ENST00000607443 133 ntBASIC4.48□□□□□ -1.69
BRCC3P46736 AL138721.1-201ENST00000616756 179 ntBASIC4.48□□□□□ -1.69
BRCC3P46736 AC140113.4-201ENST00000622087 222 ntBASIC4.48□□□□□ -1.69
BRCC3P46736 AC019278.1-201ENST00000623516 479 ntBASIC4.48□□□□□ -1.69
BRCC3P46736 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
BRCC3P46736 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.48□□□□□ -1.69
BRCC3P46736 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.48□□□□□ -1.69
BRCC3P46736 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.48□□□□□ -1.69
BRCC3P46736 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
BRCC3P46736 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
BRCC3P46736 AC104118.1-201ENST00000607625 1589 ntBASIC4.48□□□□□ -1.69
BRCC3P46736 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
BRCC3P46736 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
BRCC3P46736 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.47□□□□□ -1.69
BRCC3P46736 OR11H4-201ENST00000315409 1082 ntBASIC4.47□□□□□ -1.69
BRCC3P46736 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
BRCC3P46736 IL6STP1-201ENST00000346911 1020 ntBASIC4.47□□□□□ -1.69
BRCC3P46736 MIR134-201ENST00000385258 73 ntBASIC4.47□□□□□ -1.69
BRCC3P46736 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.47□□□□□ -1.69
BRCC3P46736 AC108032.1-201ENST00000416706 207 ntBASIC4.47□□□□□ -1.69
BRCC3P46736 AL161631.1-201ENST00000417933 486 ntBASIC4.47□□□□□ -1.69
BRCC3P46736 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
BRCC3P46736 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.47□□□□□ -1.69
BRCC3P46736 AL590762.3-201ENST00000436372 640 ntBASIC4.47□□□□□ -1.69
BRCC3P46736 RPL23AP46-201ENST00000438548 490 ntBASIC4.47□□□□□ -1.69
BRCC3P46736 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.47□□□□□ -1.69
BRCC3P46736 RPS15AP29-201ENST00000445539 400 ntBASIC4.47□□□□□ -1.69
BRCC3P46736 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.47□□□□□ -1.69
BRCC3P46736 RPL5P32-201ENST00000454085 879 ntBASIC4.47□□□□□ -1.69
BRCC3P46736 RNA5SP246-201ENST00000458909 119 ntBASIC4.47□□□□□ -1.69
BRCC3P46736 AL049829.1-201ENST00000465411 156 ntBASIC4.47□□□□□ -1.69
BRCC3P46736 RPL23AP65-201ENST00000475608 468 ntBASIC4.47□□□□□ -1.69
BRCC3P46736 RN7SL604P-201ENST00000492589 296 ntBASIC4.47□□□□□ -1.69
BRCC3P46736 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.47□□□□□ -1.69
BRCC3P46736 HAUS1P1-201ENST00000505275 832 ntBASIC4.47□□□□□ -1.69
BRCC3P46736 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.47□□□□□ -1.69
BRCC3P46736 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.47□□□□□ -1.69
BRCC3P46736 AC021146.3-201ENST00000511911 260 ntBASIC4.47□□□□□ -1.69
BRCC3P46736 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.47□□□□□ -1.69
BRCC3P46736 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.47□□□□□ -1.69
BRCC3P46736 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.47□□□□□ -1.69
BRCC3P46736 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.47□□□□□ -1.69
BRCC3P46736 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.47□□□□□ -1.69
BRCC3P46736 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.47□□□□□ -1.69
BRCC3P46736 AC135803.1-201ENST00000608748 565 ntBASIC4.47□□□□□ -1.69
BRCC3P46736 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
BRCC3P46736 MIR6875-201ENST00000617506 72 ntBASIC4.47□□□□□ -1.69
BRCC3P46736 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
BRCC3P46736 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
BRCC3P46736 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
BRCC3P46736 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.47□□□□□ -1.69
BRCC3P46736 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.47□□□□□ -1.69
BRCC3P46736 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.47□□□□□ -1.69
BRCC3P46736 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
BRCC3P46736 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
BRCC3P46736 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.46□□□□□ -1.69
BRCC3P46736 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.46□□□□□ -1.69
BRCC3P46736 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
BRCC3P46736 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.46□□□□□ -1.7
BRCC3P46736 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
BRCC3P46736 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
BRCC3P46736 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
BRCC3P46736 MTND4P21-201ENST00000453886 1357 ntBASIC4.46□□□□□ -1.7
BRCC3P46736 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
BRCC3P46736 RNU1-64P-201ENST00000365443 163 ntBASIC4.46□□□□□ -1.7
BRCC3P46736 MIR421-201ENST00000365696 85 ntBASIC4.46□□□□□ -1.7
BRCC3P46736 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
BRCC3P46736 ENSAP1-201ENST00000392855 326 ntBASIC4.46□□□□□ -1.7
BRCC3P46736 RPL32P23-201ENST00000397237 405 ntBASIC4.46□□□□□ -1.7
BRCC3P46736 AL512430.2-201ENST00000406786 339 ntBASIC4.46□□□□□ -1.7
BRCC3P46736 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.46□□□□□ -1.7
BRCC3P46736 CR848007.2-201ENST00000424918 787 ntBASIC4.46□□□□□ -1.7
BRCC3P46736 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.46□□□□□ -1.7
BRCC3P46736 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.46□□□□□ -1.7
BRCC3P46736 RPL21P89-201ENST00000444021 467 ntBASIC4.46□□□□□ -1.7
BRCC3P46736 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.46□□□□□ -1.7
BRCC3P46736 AL035551.1-201ENST00000446931 348 ntBASIC4.46□□□□□ -1.7
BRCC3P46736 NPM1P39-201ENST00000449818 867 ntBASIC4.46□□□□□ -1.7
BRCC3P46736 ABCF2P2-201ENST00000450549 296 ntBASIC4.46□□□□□ -1.7
BRCC3P46736 AL133244.1-201ENST00000456007 258 ntBASIC4.46□□□□□ -1.7
BRCC3P46736 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
BRCC3P46736 AC108145.1-201ENST00000503770 153 ntBASIC4.46□□□□□ -1.7
BRCC3P46736 HPRT1P2-201ENST00000505250 544 ntBASIC4.46□□□□□ -1.7
BRCC3P46736 AC108157.1-201ENST00000510511 539 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms