Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AC234779.1-201ENST00000425910 285 ntBASIC4.39□□□□□ -1.71
TRIM23P36406 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM23P36406 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM23P36406 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM23P36406 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM23P36406 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM23P36406 AC104306.1-201ENST00000449702 371 ntBASIC4.39□□□□□ -1.71
TRIM23P36406 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.39□□□□□ -1.71
TRIM23P36406 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM23P36406 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM23P36406 RNU6-347P-201ENST00000516658 105 ntBASIC4.39□□□□□ -1.71
TRIM23P36406 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM23P36406 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.39□□□□□ -1.71
TRIM23P36406 AL352979.3-201ENST00000553515 247 ntBASIC4.39□□□□□ -1.71
TRIM23P36406 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.39□□□□□ -1.71
TRIM23P36406 AC027176.2-201ENST00000559166 746 ntBASIC4.39□□□□□ -1.71
TRIM23P36406 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM23P36406 AL590392.1-201ENST00000604960 446 ntBASIC4.39□□□□□ -1.71
TRIM23P36406 AC114781.5-201ENST00000615297 108 ntBASIC4.39□□□□□ -1.71
TRIM23P36406 MIR6830-201ENST00000636015 70 ntBASIC4.39□□□□□ -1.71
TRIM23P36406 EIF2AP4-201ENST00000424793 1781 ntBASIC4.39□□□□□ -1.71
TRIM23P36406 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
TRIM23P36406 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM23P36406 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.39□□□□□ -1.71
TRIM23P36406 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
TRIM23P36406 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM23P36406 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.38□□□□□ -1.71
TRIM23P36406 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.38□□□□□ -1.71
TRIM23P36406 NXPH1-205ENST00000602349 1953 ntBASIC4.38□□□□□ -1.71
TRIM23P36406 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.38□□□□□ -1.71
TRIM23P36406 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM23P36406 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM23P36406 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM23P36406 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
TRIM23P36406 MIR92A2-201ENST00000385299 75 ntBASIC4.38□□□□□ -1.71
TRIM23P36406 AL078604.1-201ENST00000404609 466 ntBASIC4.38□□□□□ -1.71
TRIM23P36406 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.38□□□□□ -1.71
TRIM23P36406 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM23P36406 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM23P36406 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
TRIM23P36406 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM23P36406 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.38□□□□□ -1.71
TRIM23P36406 AC007000.2-201ENST00000442564 487 ntBASIC4.38□□□□□ -1.71
TRIM23P36406 PHBP16-201ENST00000446318 950 ntBASIC4.38□□□□□ -1.71
TRIM23P36406 EEF1A1P1-201ENST00000447052 739 ntBASIC4.38□□□□□ -1.71
TRIM23P36406 MTND2P25-201ENST00000449028 610 ntBASIC4.38□□□□□ -1.71
TRIM23P36406 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM23P36406 AL353718.1-201ENST00000451028 517 ntBASIC4.38□□□□□ -1.71
TRIM23P36406 AL645939.1-201ENST00000453429 797 ntBASIC4.38□□□□□ -1.71
TRIM23P36406 PPIAP21-201ENST00000464473 501 ntBASIC4.38□□□□□ -1.71
TRIM23P36406 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
TRIM23P36406 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM23P36406 AC005912.1-201ENST00000495392 255 ntBASIC4.38□□□□□ -1.71
TRIM23P36406 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.38□□□□□ -1.71
TRIM23P36406 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM23P36406 AC106806.2-201ENST00000509365 500 ntBASIC4.38□□□□□ -1.71
TRIM23P36406 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.38□□□□□ -1.71
TRIM23P36406 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM23P36406 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.38□□□□□ -1.71
TRIM23P36406 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM23P36406 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM23P36406 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM23P36406 IGLVIV-53-201ENST00000520107 367 ntBASIC4.38□□□□□ -1.71
TRIM23P36406 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.38□□□□□ -1.71
TRIM23P36406 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.38□□□□□ -1.71
TRIM23P36406 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM23P36406 MIR3138-201ENST00000585238 82 ntBASIC4.38□□□□□ -1.71
TRIM23P36406 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.38□□□□□ -1.71
TRIM23P36406 AC113403.1-201ENST00000604910 193 ntBASIC4.38□□□□□ -1.71
TRIM23P36406 AC010200.2-201ENST00000605098 235 ntBASIC4.38□□□□□ -1.71
TRIM23P36406 AP002360.3-201ENST00000607673 710 ntBASIC4.38□□□□□ -1.71
TRIM23P36406 AC015813.4-201ENST00000610469 179 ntBASIC4.38□□□□□ -1.71
TRIM23P36406 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM23P36406 AC234782.5-201ENST00000617723 324 ntBASIC4.38□□□□□ -1.71
TRIM23P36406 AL645927.2-201ENST00000618350 349 ntBASIC4.38□□□□□ -1.71
TRIM23P36406 AC091905.2-201ENST00000623143 306 ntBASIC4.38□□□□□ -1.71
TRIM23P36406 AC007342.8-201ENST00000623278 678 ntBASIC4.38□□□□□ -1.71
TRIM23P36406 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM23P36406 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM23P36406 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM23P36406 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM23P36406 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.38□□□□□ -1.71
TRIM23P36406 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.38□□□□□ -1.71
TRIM23P36406 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM23P36406 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM23P36406 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM23P36406 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM23P36406 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.38□□□□□ -1.71
TRIM23P36406 AC006971.1-201ENST00000407916 4486 ntBASIC4.38□□□□□ -1.71
TRIM23P36406 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM23P36406 AC068254.2-201ENST00000623938 3577 ntBASIC4.38□□□□□ -1.71
TRIM23P36406 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM23P36406 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
TRIM23P36406 AC009951.1-201ENST00000623674 2614 ntBASIC4.37□□□□□ -1.71
TRIM23P36406 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
TRIM23P36406 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM23P36406 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM23P36406 RAD1P1-201ENST00000231383 813 ntBASIC4.37□□□□□ -1.71
TRIM23P36406 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
TRIM23P36406 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms