Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CASQ1P31415 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CASQ1P31415 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CASQ1P31415 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CASQ1P31415 USP8P1-201ENST00000494673 3183 ntBASIC4.48□□□□□ -1.69
CASQ1P31415 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CASQ1P31415 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CASQ1P31415 MIR765-201ENST00000390226 114 ntBASIC4.48□□□□□ -1.69
CASQ1P31415 RNU6-328P-201ENST00000390887 106 ntBASIC4.48□□□□□ -1.69
CASQ1P31415 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CASQ1P31415 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.48□□□□□ -1.69
CASQ1P31415 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.48□□□□□ -1.69
CASQ1P31415 AL139095.3-201ENST00000419672 1203 ntBASIC4.48□□□□□ -1.69
CASQ1P31415 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.48□□□□□ -1.69
CASQ1P31415 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
CASQ1P31415 ATP5HP2-201ENST00000433885 485 ntBASIC4.48□□□□□ -1.69
CASQ1P31415 VN1R25P-201ENST00000443385 738 ntBASIC4.48□□□□□ -1.69
CASQ1P31415 VN1R40P-201ENST00000455196 941 ntBASIC4.48□□□□□ -1.69
CASQ1P31415 AC053481.1-201ENST00000467217 306 ntBASIC4.48□□□□□ -1.69
CASQ1P31415 RN7SL174P-201ENST00000475578 289 ntBASIC4.48□□□□□ -1.69
CASQ1P31415 AC078817.1-201ENST00000492623 435 ntBASIC4.48□□□□□ -1.69
CASQ1P31415 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.48□□□□□ -1.69
CASQ1P31415 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.48□□□□□ -1.69
CASQ1P31415 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.48□□□□□ -1.69
CASQ1P31415 RNA5SP92-201ENST00000516437 110 ntBASIC4.48□□□□□ -1.69
CASQ1P31415 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.48□□□□□ -1.69
CASQ1P31415 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.48□□□□□ -1.69
CASQ1P31415 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.48□□□□□ -1.69
CASQ1P31415 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.48□□□□□ -1.69
CASQ1P31415 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.48□□□□□ -1.69
CASQ1P31415 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.48□□□□□ -1.69
CASQ1P31415 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.48□□□□□ -1.69
CASQ1P31415 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.48□□□□□ -1.69
CASQ1P31415 AL354984.3-201ENST00000604803 325 ntBASIC4.48□□□□□ -1.69
CASQ1P31415 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.48□□□□□ -1.69
CASQ1P31415 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.48□□□□□ -1.69
CASQ1P31415 AC105429.2-201ENST00000610567 517 ntBASIC4.48□□□□□ -1.69
CASQ1P31415 AL133243.1-201ENST00000614487 366 ntBASIC4.48□□□□□ -1.69
CASQ1P31415 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.48□□□□□ -1.69
CASQ1P31415 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.48□□□□□ -1.69
CASQ1P31415 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.48□□□□□ -1.69
CASQ1P31415 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CASQ1P31415 GABPAP-201ENST00000419271 1356 ntBASIC4.48□□□□□ -1.69
CASQ1P31415 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CASQ1P31415 SEPT7P7-201ENST00000420492 1301 ntBASIC4.47□□□□□ -1.69
CASQ1P31415 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CASQ1P31415 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CASQ1P31415 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
CASQ1P31415 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CASQ1P31415 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CASQ1P31415 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.47□□□□□ -1.69
CASQ1P31415 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CASQ1P31415 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CASQ1P31415 CCNB2P1-201ENST00000399411 1150 ntBASIC4.47□□□□□ -1.69
CASQ1P31415 AL391361.1-201ENST00000405580 489 ntBASIC4.47□□□□□ -1.69
CASQ1P31415 RNU2-37P-201ENST00000410695 177 ntBASIC4.47□□□□□ -1.69
CASQ1P31415 AC119751.6-201ENST00000416712 186 ntBASIC4.47□□□□□ -1.69
CASQ1P31415 MTND4P11-201ENST00000417020 1058 ntBASIC4.47□□□□□ -1.69
CASQ1P31415 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.47□□□□□ -1.69
CASQ1P31415 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.47□□□□□ -1.69
CASQ1P31415 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CASQ1P31415 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4.47□□□□□ -1.69
CASQ1P31415 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.47□□□□□ -1.69
CASQ1P31415 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.47□□□□□ -1.69
CASQ1P31415 RPL31P53-201ENST00000457065 348 ntBASIC4.47□□□□□ -1.69
CASQ1P31415 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.47□□□□□ -1.69
CASQ1P31415 RPL23AP72-201ENST00000492447 435 ntBASIC4.47□□□□□ -1.69
CASQ1P31415 RPL5P23-201ENST00000496040 868 ntBASIC4.47□□□□□ -1.69
CASQ1P31415 RPL7P47-201ENST00000497299 556 ntBASIC4.47□□□□□ -1.69
CASQ1P31415 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.47□□□□□ -1.69
CASQ1P31415 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.47□□□□□ -1.69
CASQ1P31415 MTATP6P22-201ENST00000507369 598 ntBASIC4.47□□□□□ -1.69
CASQ1P31415 AC090568.1-201ENST00000509499 856 ntBASIC4.47□□□□□ -1.69
CASQ1P31415 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.47□□□□□ -1.69
CASQ1P31415 OR4A2P-201ENST00000527276 913 ntBASIC4.47□□□□□ -1.69
CASQ1P31415 OR5M2P-201ENST00000529003 936 ntBASIC4.47□□□□□ -1.69
CASQ1P31415 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CASQ1P31415 OR5D15P-201ENST00000531671 942 ntBASIC4.47□□□□□ -1.69
CASQ1P31415 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.47□□□□□ -1.69
CASQ1P31415 AC008083.2-201ENST00000546707 476 ntBASIC4.47□□□□□ -1.69
CASQ1P31415 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
CASQ1P31415 GNRHR2P1-201ENST00000555315 631 ntBASIC4.47□□□□□ -1.69
CASQ1P31415 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.47□□□□□ -1.69
CASQ1P31415 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.47□□□□□ -1.69
CASQ1P31415 MRPS35P3-201ENST00000603189 709 ntBASIC4.47□□□□□ -1.69
CASQ1P31415 AC104662.1-201ENST00000604448 511 ntBASIC4.47□□□□□ -1.69
CASQ1P31415 RPL23AP61-201ENST00000623642 466 ntBASIC4.47□□□□□ -1.69
CASQ1P31415 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.47□□□□□ -1.69
CASQ1P31415 AC008013.2-202ENST00000637965 364 ntBASIC4.47□□□□□ -1.69
CASQ1P31415 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CASQ1P31415 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CASQ1P31415 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CASQ1P31415 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CASQ1P31415 EIF2AP4-201ENST00000424793 1781 ntBASIC4.47□□□□□ -1.69
CASQ1P31415 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.47□□□□□ -1.69
CASQ1P31415 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.46□□□□□ -1.69
CASQ1P31415 RNU1-130P-201ENST00000363930 160 ntBASIC4.46□□□□□ -1.7
CASQ1P31415 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CASQ1P31415 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CASQ1P31415 PGBD4P8-201ENST00000412993 562 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms