Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.27□□□□□ -1.73
HOXA6P31267 AL354984.3-201ENST00000604803 325 ntBASIC4.27□□□□□ -1.73
HOXA6P31267 AC007546.1-201ENST00000619452 559 ntBASIC4.27□□□□□ -1.73
HOXA6P31267 AC012442.3-202ENST00000636742 206 ntBASIC4.27□□□□□ -1.73
HOXA6P31267 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HOXA6P31267 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXA6P31267 CASC19-261ENST00000641853 1638 ntBASIC4.27□□□□□ -1.73
HOXA6P31267 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXA6P31267 MAPK10-372ENST00000641954 3413 ntBASIC4.27□□□□□ -1.73
HOXA6P31267 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HOXA6P31267 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HOXA6P31267 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXA6P31267 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.26□□□□□ -1.73
HOXA6P31267 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
HOXA6P31267 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXA6P31267 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXA6P31267 SCN1A-220ENST00000641603 12506 ntBASIC4.26□□□□□ -1.73
HOXA6P31267 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HOXA6P31267 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXA6P31267 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXA6P31267 RNA5SP307-201ENST00000362863 116 ntBASIC4.26□□□□□ -1.73
HOXA6P31267 RNU4-7P-201ENST00000364758 141 ntBASIC4.26□□□□□ -1.73
HOXA6P31267 RNU6-761P-201ENST00000384148 107 ntBASIC4.26□□□□□ -1.73
HOXA6P31267 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.26□□□□□ -1.73
HOXA6P31267 RPL21P91-201ENST00000429231 479 ntBASIC4.26□□□□□ -1.73
HOXA6P31267 MTCO1P54-201ENST00000430139 712 ntBASIC4.26□□□□□ -1.73
HOXA6P31267 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXA6P31267 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.26□□□□□ -1.73
HOXA6P31267 RPL23AP83-201ENST00000434984 473 ntBASIC4.26□□□□□ -1.73
HOXA6P31267 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXA6P31267 AL500522.2-201ENST00000448562 343 ntBASIC4.26□□□□□ -1.73
HOXA6P31267 DDX39BP2-208ENST00000453923 258 ntBASIC4.26□□□□□ -1.73
HOXA6P31267 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HOXA6P31267 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXA6P31267 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.26□□□□□ -1.73
HOXA6P31267 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.26□□□□□ -1.73
HOXA6P31267 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXA6P31267 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXA6P31267 AL606490.9-201ENST00000603331 271 ntBASIC4.26□□□□□ -1.73
HOXA6P31267 AC090953.1-201ENST00000604305 1092 ntBASIC4.26□□□□□ -1.73
HOXA6P31267 AC008966.2-201ENST00000606157 453 ntBASIC4.26□□□□□ -1.73
HOXA6P31267 AC015813.4-201ENST00000610469 179 ntBASIC4.26□□□□□ -1.73
HOXA6P31267 AC000123.2-201ENST00000623124 461 ntBASIC4.26□□□□□ -1.73
HOXA6P31267 AC091905.2-201ENST00000623143 306 ntBASIC4.26□□□□□ -1.73
HOXA6P31267 CFTRP2-201ENST00000634304 199 ntBASIC4.26□□□□□ -1.73
HOXA6P31267 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.26□□□□□ -1.73
HOXA6P31267 FP325313.1-201ENST00000638228 703 ntBASIC4.26□□□□□ -1.73
HOXA6P31267 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HOXA6P31267 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
HOXA6P31267 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HOXA6P31267 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXA6P31267 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXA6P31267 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXA6P31267 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXA6P31267 NOL8P1-201ENST00000508336 3529 ntBASIC4.25□□□□□ -1.73
HOXA6P31267 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXA6P31267 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXA6P31267 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
HOXA6P31267 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
HOXA6P31267 SNORA63.1-201ENST00000362493 131 ntBASIC4.25□□□□□ -1.73
HOXA6P31267 RNU6-1331P-201ENST00000363658 106 ntBASIC4.25□□□□□ -1.73
HOXA6P31267 RNA5SP387-201ENST00000364226 106 ntBASIC4.25□□□□□ -1.73
HOXA6P31267 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.25□□□□□ -1.73
HOXA6P31267 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXA6P31267 AC097374.1-203ENST00000400783 485 ntBASIC4.25□□□□□ -1.73
HOXA6P31267 RAC1P3-201ENST00000416129 580 ntBASIC4.25□□□□□ -1.73
HOXA6P31267 AC073464.3-201ENST00000422564 712 ntBASIC4.25□□□□□ -1.73
HOXA6P31267 AL138785.1-201ENST00000425821 331 ntBASIC4.25□□□□□ -1.73
HOXA6P31267 FTH1P6-201ENST00000430768 320 ntBASIC4.25□□□□□ -1.73
HOXA6P31267 RPL23AP25-201ENST00000430973 463 ntBASIC4.25□□□□□ -1.73
HOXA6P31267 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXA6P31267 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.25□□□□□ -1.73
HOXA6P31267 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.25□□□□□ -1.73
HOXA6P31267 RPL35AP15-201ENST00000468042 339 ntBASIC4.25□□□□□ -1.73
HOXA6P31267 AP000926.1-201ENST00000479573 241 ntBASIC4.25□□□□□ -1.73
HOXA6P31267 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HOXA6P31267 DSTNP2-201ENST00000504533 515 ntBASIC4.25□□□□□ -1.73
HOXA6P31267 HMGB3P16-201ENST00000508037 287 ntBASIC4.25□□□□□ -1.73
HOXA6P31267 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXA6P31267 AC021146.3-201ENST00000511911 260 ntBASIC4.25□□□□□ -1.73
HOXA6P31267 IGLVIV-53-201ENST00000520107 367 ntBASIC4.25□□□□□ -1.73
HOXA6P31267 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXA6P31267 AC068714.1-201ENST00000559623 800 ntBASIC4.25□□□□□ -1.73
HOXA6P31267 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.25□□□□□ -1.73
HOXA6P31267 MIR4716-201ENST00000579628 84 ntBASIC4.25□□□□□ -1.73
HOXA6P31267 AC107982.3-201ENST00000584957 985 ntBASIC4.25□□□□□ -1.73
HOXA6P31267 VN1R79P-201ENST00000593540 513 ntBASIC4.25□□□□□ -1.73
HOXA6P31267 AC015914.2-201ENST00000618167 288 ntBASIC4.25□□□□□ -1.73
HOXA6P31267 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
HOXA6P31267 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXA6P31267 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.25□□□□□ -1.73
HOXA6P31267 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.25□□□□□ -1.73
HOXA6P31267 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXA6P31267 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXA6P31267 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXA6P31267 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXA6P31267 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.25□□□□□ -1.73
HOXA6P31267 AP000542.2-201ENST00000623199 6179 ntBASIC4.25□□□□□ -1.73
HOXA6P31267 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXA6P31267 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms