Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 ARL4AP3-201ENST00000441452 574 ntBASIC4.78□□□□□ -1.64
COL5A3P25940 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.78□□□□□ -1.64
COL5A3P25940 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.78□□□□□ -1.64
COL5A3P25940 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.78□□□□□ -1.64
COL5A3P25940 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL5A3P25940 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL5A3P25940 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
COL5A3P25940 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
COL5A3P25940 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL5A3P25940 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
COL5A3P25940 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.78□□□□□ -1.64
COL5A3P25940 RN7SKP177-201ENST00000410567 355 ntBASIC4.77□□□□□ -1.65
COL5A3P25940 DBIP2-201ENST00000419076 262 ntBASIC4.77□□□□□ -1.65
COL5A3P25940 APOOP2-201ENST00000461561 539 ntBASIC4.77□□□□□ -1.65
COL5A3P25940 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.77□□□□□ -1.65
COL5A3P25940 RANP9-201ENST00000519957 271 ntBASIC4.77□□□□□ -1.65
COL5A3P25940 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.77□□□□□ -1.65
COL5A3P25940 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.77□□□□□ -1.65
COL5A3P25940 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.77□□□□□ -1.65
COL5A3P25940 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL5A3P25940 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.77□□□□□ -1.65
COL5A3P25940 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COL5A3P25940 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL5A3P25940 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COL5A3P25940 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.77□□□□□ -1.65
COL5A3P25940 AC092641.1-201ENST00000440229 772 ntBASIC4.77□□□□□ -1.65
COL5A3P25940 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.77□□□□□ -1.65
COL5A3P25940 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.77□□□□□ -1.65
COL5A3P25940 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.77□□□□□ -1.65
COL5A3P25940 RPL21P12-201ENST00000559810 515 ntBASIC4.77□□□□□ -1.65
COL5A3P25940 AC133552.5-201ENST00000604266 540 ntBASIC4.77□□□□□ -1.65
COL5A3P25940 AC005000.2-201ENST00000605468 310 ntBASIC4.77□□□□□ -1.65
COL5A3P25940 SNORA62.6-201ENST00000606322 83 ntBASIC4.77□□□□□ -1.65
COL5A3P25940 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.77□□□□□ -1.65
COL5A3P25940 AC138965.3-201ENST00000623875 498 ntBASIC4.77□□□□□ -1.65
COL5A3P25940 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL5A3P25940 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.77□□□□□ -1.65
COL5A3P25940 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COL5A3P25940 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.76□□□□□ -1.65
COL5A3P25940 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.76□□□□□ -1.65
COL5A3P25940 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL5A3P25940 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.76□□□□□ -1.65
COL5A3P25940 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.76□□□□□ -1.65
COL5A3P25940 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.76□□□□□ -1.65
COL5A3P25940 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.76□□□□□ -1.65
COL5A3P25940 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.76□□□□□ -1.65
COL5A3P25940 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL5A3P25940 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.76□□□□□ -1.65
COL5A3P25940 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.76□□□□□ -1.65
COL5A3P25940 AP000553.6-201ENST00000641242 118 ntBASIC4.76□□□□□ -1.65
COL5A3P25940 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COL5A3P25940 AP001642.1-201ENST00000624727 2117 ntBASIC4.76□□□□□ -1.65
COL5A3P25940 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COL5A3P25940 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL5A3P25940 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
COL5A3P25940 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL5A3P25940 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COL5A3P25940 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.75□□□□□ -1.65
COL5A3P25940 NAMPTP1-201ENST00000440465 2514 ntBASIC4.75□□□□□ -1.65
COL5A3P25940 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL5A3P25940 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL5A3P25940 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
COL5A3P25940 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.75□□□□□ -1.65
COL5A3P25940 HSFY1P1-201ENST00000423928 1178 ntBASIC4.75□□□□□ -1.65
COL5A3P25940 AC017083.1-201ENST00000428093 483 ntBASIC4.75□□□□□ -1.65
COL5A3P25940 AC011742.1-201ENST00000431448 434 ntBASIC4.75□□□□□ -1.65
COL5A3P25940 SETD6P1-201ENST00000444575 317 ntBASIC4.75□□□□□ -1.65
COL5A3P25940 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.75□□□□□ -1.65
COL5A3P25940 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.75□□□□□ -1.65
COL5A3P25940 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.75□□□□□ -1.65
COL5A3P25940 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.75□□□□□ -1.65
COL5A3P25940 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.75□□□□□ -1.65
COL5A3P25940 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.75□□□□□ -1.65
COL5A3P25940 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.75□□□□□ -1.65
COL5A3P25940 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL5A3P25940 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL5A3P25940 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.75□□□□□ -1.65
COL5A3P25940 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
COL5A3P25940 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL5A3P25940 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL5A3P25940 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC4.75□□□□□ -1.65
COL5A3P25940 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL5A3P25940 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.75□□□□□ -1.65
COL5A3P25940 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.75□□□□□ -1.65
COL5A3P25940 AC005008.1-201ENST00000456151 612 ntBASIC4.75□□□□□ -1.65
COL5A3P25940 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.75□□□□□ -1.65
COL5A3P25940 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.75□□□□□ -1.65
COL5A3P25940 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.75□□□□□ -1.65
COL5A3P25940 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.75□□□□□ -1.65
COL5A3P25940 OR4A12P-201ENST00000530847 918 ntBASIC4.75□□□□□ -1.65
COL5A3P25940 GNRHR2P1-201ENST00000555315 631 ntBASIC4.75□□□□□ -1.65
COL5A3P25940 GTF2IP8-201ENST00000560687 584 ntBASIC4.75□□□□□ -1.65
COL5A3P25940 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL5A3P25940 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.74□□□□□ -1.65
COL5A3P25940 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL5A3P25940 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL5A3P25940 GVINP1-202ENST00000531871 7271 ntBASIC4.74□□□□□ -1.65
COL5A3P25940 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL5A3P25940 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL5A3P25940 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms