Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 RPL36AP15-201ENST00000444514 266 ntBASIC4.54□□□□□ -1.68
TPM3P06753 AC016724.1-201ENST00000453215 421 ntBASIC4.54□□□□□ -1.68
TPM3P06753 AC018638.3-201ENST00000461273 132 ntBASIC4.54□□□□□ -1.68
TPM3P06753 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.54□□□□□ -1.68
TPM3P06753 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.54□□□□□ -1.68
TPM3P06753 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.54□□□□□ -1.68
TPM3P06753 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.54□□□□□ -1.68
TPM3P06753 KCTD9P2-201ENST00000512203 1013 ntBASIC4.54□□□□□ -1.68
TPM3P06753 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.54□□□□□ -1.68
TPM3P06753 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.54□□□□□ -1.68
TPM3P06753 AC092747.2-201ENST00000545069 983 ntBASIC4.54□□□□□ -1.68
TPM3P06753 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TPM3P06753 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.54□□□□□ -1.68
TPM3P06753 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
TPM3P06753 AC020910.2-201ENST00000603635 610 ntBASIC4.54□□□□□ -1.68
TPM3P06753 AC010200.2-201ENST00000605098 235 ntBASIC4.54□□□□□ -1.68
TPM3P06753 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.54□□□□□ -1.68
TPM3P06753 AC023043.4-201ENST00000612081 449 ntBASIC4.54□□□□□ -1.68
TPM3P06753 AC016769.4-201ENST00000616893 535 ntBASIC4.54□□□□□ -1.68
TPM3P06753 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.54□□□□□ -1.68
TPM3P06753 AC002044.3-201ENST00000623314 541 ntBASIC4.54□□□□□ -1.68
TPM3P06753 AP003072.5-201ENST00000623872 773 ntBASIC4.54□□□□□ -1.68
TPM3P06753 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
TPM3P06753 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
TPM3P06753 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TPM3P06753 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
TPM3P06753 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.53□□□□□ -1.68
TPM3P06753 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.53□□□□□ -1.68
TPM3P06753 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TPM3P06753 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TPM3P06753 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.53□□□□□ -1.68
TPM3P06753 CIR1P2-201ENST00000514821 1342 ntBASIC4.53□□□□□ -1.68
TPM3P06753 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.53□□□□□ -1.68
TPM3P06753 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TPM3P06753 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TPM3P06753 RNU4-7P-201ENST00000364758 141 ntBASIC4.53□□□□□ -1.68
TPM3P06753 SNORD6-201ENST00000365444 73 ntBASIC4.53□□□□□ -1.68
TPM3P06753 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TPM3P06753 RPL30P2-201ENST00000414021 291 ntBASIC4.53□□□□□ -1.68
TPM3P06753 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.53□□□□□ -1.68
TPM3P06753 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.53□□□□□ -1.68
TPM3P06753 HMGB3P5-201ENST00000428894 612 ntBASIC4.53□□□□□ -1.68
TPM3P06753 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.53□□□□□ -1.68
TPM3P06753 PTMAP6-201ENST00000439110 327 ntBASIC4.53□□□□□ -1.68
TPM3P06753 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.53□□□□□ -1.68
TPM3P06753 SERPINA7P1-201ENST00000443077 631 ntBASIC4.53□□□□□ -1.68
TPM3P06753 MTND6P6-201ENST00000478031 263 ntBASIC4.53□□□□□ -1.68
TPM3P06753 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.53□□□□□ -1.68
TPM3P06753 OR5M14P-201ENST00000506803 618 ntBASIC4.53□□□□□ -1.68
TPM3P06753 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.53□□□□□ -1.68
TPM3P06753 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.53□□□□□ -1.68
TPM3P06753 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.53□□□□□ -1.68
TPM3P06753 OR5AN2P-201ENST00000534535 896 ntBASIC4.53□□□□□ -1.68
TPM3P06753 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.53□□□□□ -1.68
TPM3P06753 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.53□□□□□ -1.68
TPM3P06753 RPL23AP87-202ENST00000573039 466 ntBASIC4.53□□□□□ -1.68
TPM3P06753 AC012417.1-201ENST00000582307 1039 ntBASIC4.53□□□□□ -1.68
TPM3P06753 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.53□□□□□ -1.68
TPM3P06753 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.53□□□□□ -1.68
TPM3P06753 AL049844.2-201ENST00000604280 628 ntBASIC4.53□□□□□ -1.68
TPM3P06753 AC090246.1-201ENST00000616499 426 ntBASIC4.53□□□□□ -1.68
TPM3P06753 MIR6886-201ENST00000619864 61 ntBASIC4.53□□□□□ -1.68
TPM3P06753 AL445363.3-201ENST00000623080 671 ntBASIC4.53□□□□□ -1.68
TPM3P06753 AC004943.3-201ENST00000624116 600 ntBASIC4.53□□□□□ -1.68
TPM3P06753 OR5AC4P-202ENST00000642086 985 ntBASIC4.53□□□□□ -1.68
TPM3P06753 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.53□□□□□ -1.68
TPM3P06753 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TPM3P06753 CEP170P1-201ENST00000502249 4587 ntBASIC4.53□□□□□ -1.68
TPM3P06753 RARSP1-201ENST00000542842 1418 ntBASIC4.53□□□□□ -1.68
TPM3P06753 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.53□□□□□ -1.68
TPM3P06753 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TPM3P06753 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TPM3P06753 EIF2AP4-201ENST00000424793 1781 ntBASIC4.53□□□□□ -1.69
TPM3P06753 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.52□□□□□ -1.69
TPM3P06753 AL139811.1-201ENST00000424779 2299 ntBASIC4.52□□□□□ -1.69
TPM3P06753 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.52□□□□□ -1.69
TPM3P06753 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.52□□□□□ -1.69
TPM3P06753 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TPM3P06753 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
TPM3P06753 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
TPM3P06753 AL583835.1-201ENST00000399570 407 ntBASIC4.52□□□□□ -1.69
TPM3P06753 RNA5SP36-201ENST00000410197 133 ntBASIC4.52□□□□□ -1.69
TPM3P06753 RN7SKP235-201ENST00000410662 305 ntBASIC4.52□□□□□ -1.69
TPM3P06753 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TPM3P06753 AC127526.1-201ENST00000417526 366 ntBASIC4.52□□□□□ -1.69
TPM3P06753 PTP4A1P5-201ENST00000420305 455 ntBASIC4.52□□□□□ -1.69
TPM3P06753 NPM1P34-201ENST00000428821 893 ntBASIC4.52□□□□□ -1.69
TPM3P06753 RN7SL98P-201ENST00000462271 300 ntBASIC4.52□□□□□ -1.69
TPM3P06753 RN7SL810P-201ENST00000493031 276 ntBASIC4.52□□□□□ -1.69
TPM3P06753 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TPM3P06753 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.52□□□□□ -1.69
TPM3P06753 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TPM3P06753 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
TPM3P06753 RNU7-143P-201ENST00000516781 65 ntBASIC4.52□□□□□ -1.69
TPM3P06753 SMARCE1P4-201ENST00000523647 241 ntBASIC4.52□□□□□ -1.69
TPM3P06753 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
TPM3P06753 AC022968.1-201ENST00000567372 442 ntBASIC4.52□□□□□ -1.69
TPM3P06753 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.52□□□□□ -1.69
TPM3P06753 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.52□□□□□ -1.69
TPM3P06753 VN1R84P-201ENST00000593697 235 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms