Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CD74P04233 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CD74P04233 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
CD74P04233 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CD74P04233 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.57□□□□□ -1.84
CD74P04233 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CD74P04233 AL590240.1-201ENST00000334118 313 ntBASIC3.57□□□□□ -1.84
CD74P04233 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CD74P04233 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CD74P04233 RNA5SP87-201ENST00000384155 118 ntBASIC3.57□□□□□ -1.84
CD74P04233 SNORA51.8-201ENST00000384234 132 ntBASIC3.57□□□□□ -1.84
CD74P04233 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CD74P04233 AL139095.3-201ENST00000419672 1203 ntBASIC3.57□□□□□ -1.84
CD74P04233 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.57□□□□□ -1.84
CD74P04233 AC007064.3-201ENST00000422608 359 ntBASIC3.57□□□□□ -1.84
CD74P04233 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.57□□□□□ -1.84
CD74P04233 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.57□□□□□ -1.84
CD74P04233 Z85994.2-201ENST00000434327 452 ntBASIC3.57□□□□□ -1.84
CD74P04233 AL392003.1-201ENST00000434394 243 ntBASIC3.57□□□□□ -1.84
CD74P04233 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.57□□□□□ -1.84
CD74P04233 MTCO1P14-201ENST00000441695 1559 ntBASIC3.57□□□□□ -1.84
CD74P04233 H2AFZP6-201ENST00000444403 394 ntBASIC3.57□□□□□ -1.84
CD74P04233 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.57□□□□□ -1.84
CD74P04233 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.57□□□□□ -1.84
CD74P04233 RPS3AP53-201ENST00000454716 778 ntBASIC3.57□□□□□ -1.84
CD74P04233 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC3.57□□□□□ -1.84
CD74P04233 snoU13.20-201ENST00000459180 104 ntBASIC3.57□□□□□ -1.84
CD74P04233 AC083982.1-201ENST00000485679 344 ntBASIC3.57□□□□□ -1.84
CD74P04233 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.57□□□□□ -1.84
CD74P04233 AC106872.2-201ENST00000494303 480 ntBASIC3.57□□□□□ -1.84
CD74P04233 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC3.57□□□□□ -1.84
CD74P04233 ATG10-AS1-201ENST00000504846 648 ntBASIC3.57□□□□□ -1.84
CD74P04233 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC3.57□□□□□ -1.84
CD74P04233 SEC11B-201ENST00000518383 499 ntBASIC3.57□□□□□ -1.84
CD74P04233 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CD74P04233 AC092851.1-201ENST00000535964 478 ntBASIC3.57□□□□□ -1.84
CD74P04233 AC008147.3-201ENST00000548666 354 ntBASIC3.57□□□□□ -1.84
CD74P04233 AC009117.1-201ENST00000563948 554 ntBASIC3.57□□□□□ -1.84
CD74P04233 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.57□□□□□ -1.84
CD74P04233 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CD74P04233 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.57□□□□□ -1.84
CD74P04233 AC083899.3-201ENST00000603413 594 ntBASIC3.57□□□□□ -1.84
CD74P04233 AC239803.2-201ENST00000610161 430 ntBASIC3.57□□□□□ -1.84
CD74P04233 MIR6798-201ENST00000612887 67 ntBASIC3.57□□□□□ -1.84
CD74P04233 AC095038.2-201ENST00000621464 1070 ntBASIC3.57□□□□□ -1.84
CD74P04233 AC004943.3-201ENST00000624116 600 ntBASIC3.57□□□□□ -1.84
CD74P04233 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.57□□□□□ -1.84
CD74P04233 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.57□□□□□ -1.84
CD74P04233 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CD74P04233 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CD74P04233 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.56□□□□□ -1.84
CD74P04233 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
CD74P04233 AC092162.3-201ENST00000624511 1624 ntBASIC3.56□□□□□ -1.84
CD74P04233 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CD74P04233 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CD74P04233 AC100871.1-201ENST00000507871 1456 ntBASIC3.56□□□□□ -1.84
CD74P04233 RNA5SP175-201ENST00000364275 119 ntBASIC3.56□□□□□ -1.84
CD74P04233 RNA5SP397-201ENST00000391323 118 ntBASIC3.56□□□□□ -1.84
CD74P04233 AL035419.1-201ENST00000397037 564 ntBASIC3.56□□□□□ -1.84
CD74P04233 AL035696.2-201ENST00000407941 709 ntBASIC3.56□□□□□ -1.84
CD74P04233 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.56□□□□□ -1.84
CD74P04233 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.56□□□□□ -1.84
CD74P04233 COX6B1P1-201ENST00000415962 213 ntBASIC3.56□□□□□ -1.84
CD74P04233 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.56□□□□□ -1.84
CD74P04233 AC104837.2-201ENST00000427236 424 ntBASIC3.56□□□□□ -1.84
CD74P04233 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.56□□□□□ -1.84
CD74P04233 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.56□□□□□ -1.84
CD74P04233 CEACAMP1-201ENST00000434624 1035 ntBASIC3.56□□□□□ -1.84
CD74P04233 RPL31P44-201ENST00000447680 377 ntBASIC3.56□□□□□ -1.84
CD74P04233 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.56□□□□□ -1.84
CD74P04233 RPL5P32-201ENST00000454085 879 ntBASIC3.56□□□□□ -1.84
CD74P04233 SNRPGP5-201ENST00000456003 220 ntBASIC3.56□□□□□ -1.84
CD74P04233 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.56□□□□□ -1.84
CD74P04233 AC063943.1-201ENST00000465434 453 ntBASIC3.56□□□□□ -1.84
CD74P04233 AC092324.1-201ENST00000468671 324 ntBASIC3.56□□□□□ -1.84
CD74P04233 RPS29P22-201ENST00000472363 168 ntBASIC3.56□□□□□ -1.84
CD74P04233 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.56□□□□□ -1.84
CD74P04233 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.56□□□□□ -1.84
CD74P04233 FTH1P9-201ENST00000513251 355 ntBASIC3.56□□□□□ -1.84
CD74P04233 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.56□□□□□ -1.84
CD74P04233 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.56□□□□□ -1.84
CD74P04233 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.56□□□□□ -1.84
CD74P04233 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CD74P04233 AC009268.1-201ENST00000561352 1203 ntBASIC3.56□□□□□ -1.84
CD74P04233 AC027281.1-201ENST00000574178 758 ntBASIC3.56□□□□□ -1.84
CD74P04233 MIR4480-201ENST00000582492 71 ntBASIC3.56□□□□□ -1.84
CD74P04233 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.56□□□□□ -1.84
CD74P04233 BNIP3P7-201ENST00000605641 516 ntBASIC3.56□□□□□ -1.84
CD74P04233 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.56□□□□□ -1.84
CD74P04233 MIR6748-201ENST00000610433 71 ntBASIC3.56□□□□□ -1.84
CD74P04233 AC139769.3-201ENST00000618383 175 ntBASIC3.56□□□□□ -1.84
CD74P04233 AC087385.3-201ENST00000620477 187 ntBASIC3.56□□□□□ -1.84
CD74P04233 AC091953.3-201ENST00000623220 236 ntBASIC3.56□□□□□ -1.84
CD74P04233 AP005264.7-201ENST00000625003 745 ntBASIC3.56□□□□□ -1.84
CD74P04233 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.56□□□□□ -1.84
CD74P04233 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.56□□□□□ -1.84
CD74P04233 LINC02471-203ENST00000641941 4752 ntBASIC3.56□□□□□ -1.84
CD74P04233 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.56□□□□□ -1.84
CD74P04233 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.56□□□□□ -1.84
CD74P04233 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms