Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 OOSP1P1-201ENST00000423265 274 ntBASIC3.64□□□□□ -1.83
SPTA1P02549 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.64□□□□□ -1.83
SPTA1P02549 NMNAT1P2-201ENST00000435192 860 ntBASIC3.64□□□□□ -1.83
SPTA1P02549 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.64□□□□□ -1.83
SPTA1P02549 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC3.64□□□□□ -1.83
SPTA1P02549 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.64□□□□□ -1.83
SPTA1P02549 AL157394.1-201ENST00000562983 1224 ntBASIC3.64□□□□□ -1.83
SPTA1P02549 MIR3945-201ENST00000581853 98 ntBASIC3.64□□□□□ -1.83
SPTA1P02549 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC3.64□□□□□ -1.83
SPTA1P02549 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SPTA1P02549 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
SPTA1P02549 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
SPTA1P02549 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SPTA1P02549 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
SPTA1P02549 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SPTA1P02549 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SPTA1P02549 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SPTA1P02549 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SPTA1P02549 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SPTA1P02549 EI24P3-201ENST00000399046 1062 ntBASIC3.64□□□□□ -1.83
SPTA1P02549 RPL7P58-201ENST00000402913 758 ntBASIC3.64□□□□□ -1.83
SPTA1P02549 S100A11P2-201ENST00000467589 312 ntBASIC3.64□□□□□ -1.83
SPTA1P02549 RPS3AP6-201ENST00000484430 795 ntBASIC3.64□□□□□ -1.83
SPTA1P02549 HMGN1P11-201ENST00000508668 303 ntBASIC3.64□□□□□ -1.83
SPTA1P02549 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC3.64□□□□□ -1.83
SPTA1P02549 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC3.64□□□□□ -1.83
SPTA1P02549 DPPA3P2-201ENST00000553589 478 ntBASIC3.64□□□□□ -1.83
SPTA1P02549 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.64□□□□□ -1.83
SPTA1P02549 AC022655.2-201ENST00000577280 318 ntBASIC3.64□□□□□ -1.83
SPTA1P02549 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SPTA1P02549 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.64□□□□□ -1.83
SPTA1P02549 MIR8057-201ENST00000620957 69 ntBASIC3.64□□□□□ -1.83
SPTA1P02549 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SPTA1P02549 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
SPTA1P02549 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SPTA1P02549 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SPTA1P02549 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SPTA1P02549 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
SPTA1P02549 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.63□□□□□ -1.83
SPTA1P02549 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
SPTA1P02549 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.63□□□□□ -1.83
SPTA1P02549 SNORA5.1-201ENST00000384275 131 ntBASIC3.63□□□□□ -1.83
SPTA1P02549 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.63□□□□□ -1.83
SPTA1P02549 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.63□□□□□ -1.83
SPTA1P02549 CYCSP4-201ENST00000429682 331 ntBASIC3.63□□□□□ -1.83
SPTA1P02549 NPM1P18-201ENST00000434232 732 ntBASIC3.63□□□□□ -1.83
SPTA1P02549 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SPTA1P02549 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.63□□□□□ -1.83
SPTA1P02549 RPL21P13-201ENST00000488305 481 ntBASIC3.63□□□□□ -1.83
SPTA1P02549 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SPTA1P02549 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.63□□□□□ -1.83
SPTA1P02549 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.63□□□□□ -1.83
SPTA1P02549 AC091905.2-201ENST00000623143 306 ntBASIC3.63□□□□□ -1.83
SPTA1P02549 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SPTA1P02549 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.63□□□□□ -1.83
SPTA1P02549 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SPTA1P02549 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
SPTA1P02549 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.63□□□□□ -1.83
SPTA1P02549 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SPTA1P02549 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SPTA1P02549 U1.1-201ENST00000384101 164 ntBASIC3.63□□□□□ -1.83
SPTA1P02549 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SPTA1P02549 SNORA3C-201ENST00000408792 125 ntBASIC3.63□□□□□ -1.83
SPTA1P02549 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.63□□□□□ -1.83
SPTA1P02549 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.63□□□□□ -1.83
SPTA1P02549 OR4F13P-201ENST00000428478 931 ntBASIC3.63□□□□□ -1.83
SPTA1P02549 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SPTA1P02549 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.63□□□□□ -1.83
SPTA1P02549 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SPTA1P02549 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.63□□□□□ -1.83
SPTA1P02549 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.63□□□□□ -1.83
SPTA1P02549 AL590240.3-201ENST00000621416 943 ntBASIC3.63□□□□□ -1.83
SPTA1P02549 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SPTA1P02549 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
SPTA1P02549 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
SPTA1P02549 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
SPTA1P02549 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC3.62□□□□□ -1.83
SPTA1P02549 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SPTA1P02549 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SPTA1P02549 AL592291.1-201ENST00000403830 352 ntBASIC3.62□□□□□ -1.83
SPTA1P02549 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.62□□□□□ -1.83
SPTA1P02549 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.62□□□□□ -1.83
SPTA1P02549 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.62□□□□□ -1.83
SPTA1P02549 RN7SKP18-201ENST00000516005 275 ntBASIC3.62□□□□□ -1.83
SPTA1P02549 COX6B1P6-201ENST00000522347 255 ntBASIC3.62□□□□□ -1.83
SPTA1P02549 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC3.62□□□□□ -1.83
SPTA1P02549 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.62□□□□□ -1.83
SPTA1P02549 AC005520.3-201ENST00000602874 370 ntBASIC3.62□□□□□ -1.83
SPTA1P02549 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SPTA1P02549 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SPTA1P02549 BDP1P-201ENST00000582658 1990 ntBASIC3.62□□□□□ -1.83
SPTA1P02549 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SPTA1P02549 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.62□□□□□ -1.83
SPTA1P02549 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC3.62□□□□□ -1.83
SPTA1P02549 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.62□□□□□ -1.83
SPTA1P02549 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.62□□□□□ -1.83
SPTA1P02549 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SPTA1P02549 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.62□□□□□ -1.83
SPTA1P02549 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.62□□□□□ -1.83
SPTA1P02549 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms