Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 TRIM60P18-201ENST00000441518 828 ntBASIC6.6□□□□□ -1.35
GRIN3BO60391 ST13P20-201ENST00000447996 1065 ntBASIC6.6□□□□□ -1.35
GRIN3BO60391 ANK3-207ENST00000460468 677 ntTSL 3 BASIC6.6□□□□□ -1.35
GRIN3BO60391 SLC25A51P1-201ENST00000468432 871 ntBASIC6.6□□□□□ -1.35
GRIN3BO60391 AC104687.1-201ENST00000485829 412 ntBASIC6.6□□□□□ -1.35
GRIN3BO60391 HMGN2P25-201ENST00000486956 268 ntBASIC6.6□□□□□ -1.35
GRIN3BO60391 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
GRIN3BO60391 RNU6-1225P-201ENST00000516336 65 ntBASIC6.6□□□□□ -1.35
GRIN3BO60391 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC6.6□□□□□ -1.35
GRIN3BO60391 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
GRIN3BO60391 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC6.6□□□□□ -1.35
GRIN3BO60391 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC6.6□□□□□ -1.35
GRIN3BO60391 AC245505.1-201ENST00000556398 224 ntBASIC6.6□□□□□ -1.35
GRIN3BO60391 AL133241.1-201ENST00000556832 487 ntBASIC6.6□□□□□ -1.35
GRIN3BO60391 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.6□□□□□ -1.35
GRIN3BO60391 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.6□□□□□ -1.35
GRIN3BO60391 MIR3667-201ENST00000581025 74 ntBASIC6.6□□□□□ -1.35
GRIN3BO60391 MIR4691-201ENST00000583764 85 ntBASIC6.6□□□□□ -1.35
GRIN3BO60391 AL390838.2-201ENST00000602394 274 ntBASIC6.6□□□□□ -1.35
GRIN3BO60391 NDUFA8P1-201ENST00000605525 367 ntBASIC6.6□□□□□ -1.35
GRIN3BO60391 AC010857.1-201ENST00000606398 594 ntBASIC6.6□□□□□ -1.35
GRIN3BO60391 AL121768.1-201ENST00000613917 2544 ntBASIC6.6□□□□□ -1.35
GRIN3BO60391 ASNSP1-204ENST00000641977 1664 ntBASIC6.6□□□□□ -1.35
GRIN3BO60391 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.6□□□□□ -1.35
GRIN3BO60391 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
GRIN3BO60391 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
GRIN3BO60391 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
GRIN3BO60391 ANKRD36BP1-202ENST00000604892 1417 ntBASIC6.59□□□□□ -1.35
GRIN3BO60391 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC6.59□□□□□ -1.35
GRIN3BO60391 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
GRIN3BO60391 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.59□□□□□ -1.35
GRIN3BO60391 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.59□□□□□ -1.35
GRIN3BO60391 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
GRIN3BO60391 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.59□□□□□ -1.35
GRIN3BO60391 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
GRIN3BO60391 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
GRIN3BO60391 Y_RNA.18-201ENST00000362461 102 ntBASIC6.59□□□□□ -1.35
GRIN3BO60391 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
GRIN3BO60391 RNU6-98P-201ENST00000384173 107 ntBASIC6.59□□□□□ -1.35
GRIN3BO60391 MIR16-1-201ENST00000385271 89 ntBASIC6.59□□□□□ -1.35
GRIN3BO60391 RPS26P38-201ENST00000414476 348 ntBASIC6.59□□□□□ -1.35
GRIN3BO60391 AC015977.1-201ENST00000418887 292 ntBASIC6.59□□□□□ -1.35
GRIN3BO60391 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC6.59□□□□□ -1.35
GRIN3BO60391 GAPDHP49-201ENST00000421421 961 ntBASIC6.59□□□□□ -1.35
GRIN3BO60391 RPS27AP7-201ENST00000422792 455 ntBASIC6.59□□□□□ -1.35
GRIN3BO60391 AC007161.1-204ENST00000423039 460 ntBASIC6.59□□□□□ -1.35
GRIN3BO60391 CYCSP46-201ENST00000423569 204 ntBASIC6.59□□□□□ -1.35
GRIN3BO60391 ARL6IP1P2-201ENST00000431356 563 ntBASIC6.59□□□□□ -1.35
GRIN3BO60391 TMEM183AP1-205ENST00000432739 290 ntBASIC6.59□□□□□ -1.35
GRIN3BO60391 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.59□□□□□ -1.35
GRIN3BO60391 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.59□□□□□ -1.35
GRIN3BO60391 AC079922.1-201ENST00000443291 359 ntBASIC6.59□□□□□ -1.35
GRIN3BO60391 USP9YP29-201ENST00000445112 563 ntBASIC6.59□□□□□ -1.35
GRIN3BO60391 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC6.59□□□□□ -1.35
GRIN3BO60391 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
GRIN3BO60391 DYNLL1P6-201ENST00000503440 264 ntBASIC6.59□□□□□ -1.35
GRIN3BO60391 AC083829.1-201ENST00000503756 657 ntBASIC6.59□□□□□ -1.35
GRIN3BO60391 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.59□□□□□ -1.35
GRIN3BO60391 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.59□□□□□ -1.35
GRIN3BO60391 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC6.59□□□□□ -1.35
GRIN3BO60391 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC6.59□□□□□ -1.35
GRIN3BO60391 AL139174.1-201ENST00000531489 886 ntBASIC6.59□□□□□ -1.35
GRIN3BO60391 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.59□□□□□ -1.35
GRIN3BO60391 AL121594.2-201ENST00000541658 472 ntBASIC6.59□□□□□ -1.35
GRIN3BO60391 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
GRIN3BO60391 VN1R92P-201ENST00000598511 928 ntBASIC6.59□□□□□ -1.35
GRIN3BO60391 MTCYBP22-201ENST00000603788 447 ntBASIC6.59□□□□□ -1.35
GRIN3BO60391 AC012360.2-201ENST00000609349 391 ntBASIC6.59□□□□□ -1.35
GRIN3BO60391 AC005962.2-201ENST00000611427 652 ntBASIC6.59□□□□□ -1.35
GRIN3BO60391 U1.34-201ENST00000618578 162 ntBASIC6.59□□□□□ -1.35
GRIN3BO60391 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
GRIN3BO60391 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC6.59□□□□□ -1.35
GRIN3BO60391 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.59□□□□□ -1.35
GRIN3BO60391 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC6.59□□□□□ -1.35
GRIN3BO60391 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
GRIN3BO60391 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
GRIN3BO60391 AC140479.2-201ENST00000421567 3130 ntBASIC6.59□□□□□ -1.35
GRIN3BO60391 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
GRIN3BO60391 ATP8A2P3-201ENST00000426792 1536 ntBASIC6.59□□□□□ -1.35
GRIN3BO60391 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
GRIN3BO60391 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
GRIN3BO60391 AL033543.1-201ENST00000623440 13454 ntBASIC6.59□□□□□ -1.35
GRIN3BO60391 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
GRIN3BO60391 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.59□□□□□ -1.36
GRIN3BO60391 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC6.59□□□□□ -1.36
GRIN3BO60391 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
GRIN3BO60391 AL591135.1-201ENST00000401578 5914 ntBASIC6.58□□□□□ -1.36
GRIN3BO60391 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
GRIN3BO60391 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
GRIN3BO60391 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
GRIN3BO60391 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.58□□□□□ -1.36
GRIN3BO60391 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.58□□□□□ -1.36
GRIN3BO60391 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
GRIN3BO60391 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.58□□□□□ -1.36
GRIN3BO60391 Y_RNA.41-201ENST00000362646 102 ntBASIC6.58□□□□□ -1.36
GRIN3BO60391 AL451142.1-201ENST00000375867 775 ntBASIC6.58□□□□□ -1.36
GRIN3BO60391 SNORA75-201ENST00000384158 137 ntBASIC6.58□□□□□ -1.36
GRIN3BO60391 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC6.58□□□□□ -1.36
GRIN3BO60391 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC6.58□□□□□ -1.36
GRIN3BO60391 AC234779.1-201ENST00000425910 285 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms