Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC091685.2-201ENST00000454924 864 ntBASIC4.26□□□□□ -1.73
PDLIM1O00151 RPS5P7-201ENST00000456664 608 ntBASIC4.26□□□□□ -1.73
PDLIM1O00151 AC079804.1-201ENST00000461922 436 ntBASIC4.26□□□□□ -1.73
PDLIM1O00151 CABYRP1-201ENST00000465493 1045 ntBASIC4.26□□□□□ -1.73
PDLIM1O00151 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.26□□□□□ -1.73
PDLIM1O00151 AC007537.2-201ENST00000472093 511 ntBASIC4.26□□□□□ -1.73
PDLIM1O00151 AC025164.1-201ENST00000496249 478 ntBASIC4.26□□□□□ -1.73
PDLIM1O00151 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.26□□□□□ -1.73
PDLIM1O00151 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.26□□□□□ -1.73
PDLIM1O00151 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.26□□□□□ -1.73
PDLIM1O00151 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
PDLIM1O00151 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.26□□□□□ -1.73
PDLIM1O00151 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
PDLIM1O00151 UBE2FP2-201ENST00000566646 462 ntBASIC4.26□□□□□ -1.73
PDLIM1O00151 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.26□□□□□ -1.73
PDLIM1O00151 MIR3667-201ENST00000581025 74 ntBASIC4.26□□□□□ -1.73
PDLIM1O00151 SS18L2P2-201ENST00000583960 235 ntBASIC4.26□□□□□ -1.73
PDLIM1O00151 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
PDLIM1O00151 AL450270.1-201ENST00000606160 391 ntBASIC4.26□□□□□ -1.73
PDLIM1O00151 MIR486-1-201ENST00000612171 68 ntBASIC4.26□□□□□ -1.73
PDLIM1O00151 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.26□□□□□ -1.73
PDLIM1O00151 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.26□□□□□ -1.73
PDLIM1O00151 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
PDLIM1O00151 LINC02471-203ENST00000641941 4752 ntBASIC4.26□□□□□ -1.73
PDLIM1O00151 NCLP2-201ENST00000416078 1462 ntBASIC4.25□□□□□ -1.73
PDLIM1O00151 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDLIM1O00151 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDLIM1O00151 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
PDLIM1O00151 RNU1-15P-201ENST00000353977 144 ntBASIC4.25□□□□□ -1.73
PDLIM1O00151 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDLIM1O00151 RNA5SP191-201ENST00000362585 102 ntBASIC4.25□□□□□ -1.73
PDLIM1O00151 RNVU1-6-201ENST00000364688 164 ntBASIC4.25□□□□□ -1.73
PDLIM1O00151 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.25□□□□□ -1.73
PDLIM1O00151 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
PDLIM1O00151 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDLIM1O00151 RNU1-63P-201ENST00000383902 164 ntBASIC4.25□□□□□ -1.73
PDLIM1O00151 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.25□□□□□ -1.73
PDLIM1O00151 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.25□□□□□ -1.73
PDLIM1O00151 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.25□□□□□ -1.73
PDLIM1O00151 AC073464.3-201ENST00000422564 712 ntBASIC4.25□□□□□ -1.73
PDLIM1O00151 RPL12P34-201ENST00000424532 479 ntBASIC4.25□□□□□ -1.73
PDLIM1O00151 MTCO1P54-201ENST00000430139 712 ntBASIC4.25□□□□□ -1.73
PDLIM1O00151 CDY14P-201ENST00000431260 1014 ntBASIC4.25□□□□□ -1.73
PDLIM1O00151 AL049745.1-201ENST00000433953 286 ntBASIC4.25□□□□□ -1.73
PDLIM1O00151 AC006466.1-201ENST00000438721 289 ntBASIC4.25□□□□□ -1.73
PDLIM1O00151 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.25□□□□□ -1.73
PDLIM1O00151 CDY12P-201ENST00000440679 1015 ntBASIC4.25□□□□□ -1.73
PDLIM1O00151 AL513321.1-201ENST00000441175 761 ntBASIC4.25□□□□□ -1.73
PDLIM1O00151 AC009263.1-201ENST00000441193 1239 ntBASIC4.25□□□□□ -1.73
PDLIM1O00151 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.25□□□□□ -1.73
PDLIM1O00151 AC006326.1-201ENST00000445465 787 ntBASIC4.25□□□□□ -1.73
PDLIM1O00151 CDY13P-201ENST00000445813 1015 ntBASIC4.25□□□□□ -1.73
PDLIM1O00151 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.25□□□□□ -1.73
PDLIM1O00151 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.25□□□□□ -1.73
PDLIM1O00151 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.25□□□□□ -1.73
PDLIM1O00151 CDY23P-201ENST00000451661 1014 ntBASIC4.25□□□□□ -1.73
PDLIM1O00151 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.25□□□□□ -1.73
PDLIM1O00151 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.25□□□□□ -1.73
PDLIM1O00151 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.25□□□□□ -1.73
PDLIM1O00151 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PDLIM1O00151 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.25□□□□□ -1.73
PDLIM1O00151 IGKV1-32-201ENST00000519290 311 ntBASIC4.25□□□□□ -1.73
PDLIM1O00151 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.25□□□□□ -1.73
PDLIM1O00151 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.25□□□□□ -1.73
PDLIM1O00151 AC004923.2-201ENST00000529649 369 ntBASIC4.25□□□□□ -1.73
PDLIM1O00151 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.25□□□□□ -1.73
PDLIM1O00151 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.25□□□□□ -1.73
PDLIM1O00151 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.25□□□□□ -1.73
PDLIM1O00151 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.25□□□□□ -1.73
PDLIM1O00151 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.25□□□□□ -1.73
PDLIM1O00151 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.25□□□□□ -1.73
PDLIM1O00151 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC4.25□□□□□ -1.73
PDLIM1O00151 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.25□□□□□ -1.73
PDLIM1O00151 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.25□□□□□ -1.73
PDLIM1O00151 AL512782.1-201ENST00000603093 364 ntBASIC4.25□□□□□ -1.73
PDLIM1O00151 AL049844.2-201ENST00000604280 628 ntBASIC4.25□□□□□ -1.73
PDLIM1O00151 AC012603.1-201ENST00000606424 528 ntBASIC4.25□□□□□ -1.73
PDLIM1O00151 AC116651.1-201ENST00000609724 556 ntBASIC4.25□□□□□ -1.73
PDLIM1O00151 AC025016.1-201ENST00000616746 682 ntBASIC4.25□□□□□ -1.73
PDLIM1O00151 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.25□□□□□ -1.73
PDLIM1O00151 AC020923.1-201ENST00000624021 917 ntBASIC4.25□□□□□ -1.73
PDLIM1O00151 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.25□□□□□ -1.73
PDLIM1O00151 AC106871.1-201ENST00000568324 3102 ntBASIC4.25□□□□□ -1.73
PDLIM1O00151 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
PDLIM1O00151 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDLIM1O00151 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.24□□□□□ -1.73
PDLIM1O00151 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
PDLIM1O00151 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PDLIM1O00151 RAD1P1-201ENST00000231383 813 ntBASIC4.24□□□□□ -1.73
PDLIM1O00151 RN7SKP115-201ENST00000363177 317 ntBASIC4.24□□□□□ -1.73
PDLIM1O00151 MIR320B1-201ENST00000390209 79 ntBASIC4.24□□□□□ -1.73
PDLIM1O00151 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PDLIM1O00151 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.24□□□□□ -1.73
PDLIM1O00151 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.24□□□□□ -1.73
PDLIM1O00151 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.24□□□□□ -1.73
PDLIM1O00151 AL139128.1-201ENST00000413921 941 ntBASIC4.24□□□□□ -1.73
PDLIM1O00151 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.24□□□□□ -1.73
PDLIM1O00151 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.24□□□□□ -1.73
PDLIM1O00151 NRBF2P3-201ENST00000432731 865 ntBASIC4.24□□□□□ -1.73
PDLIM1O00151 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms