Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 ATE1-AS1-202ENST00000636460 506 ntBASIC3.51□□□□□ -1.85
TRAV27A0A087WT01 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.51□□□□□ -1.85
TRAV27A0A087WT01 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TRAV27A0A087WT01 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRAV27A0A087WT01 AC018529.3-201ENST00000624212 2254 ntBASIC3.51□□□□□ -1.85
TRAV27A0A087WT01 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.51□□□□□ -1.85
TRAV27A0A087WT01 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRAV27A0A087WT01 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.51□□□□□ -1.85
TRAV27A0A087WT01 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 FAM35DP-201ENST00000323387 2712 ntBASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 RLIMP1-201ENST00000339626 1680 ntBASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 HMGN2P8-201ENST00000391458 268 ntBASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 ST13P16-201ENST00000401760 781 ntBASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 HSPD1P16-201ENST00000402302 394 ntBASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 HLFP1-201ENST00000402375 499 ntBASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 AC016397.1-201ENST00000412463 242 ntBASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 AC009302.1-201ENST00000417147 390 ntBASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 TRBV12-2-201ENST00000489763 344 ntBASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 AC083829.1-201ENST00000503756 657 ntBASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 AC005798.1-201ENST00000513715 387 ntBASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 AC138701.1-201ENST00000524329 714 ntBASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 DUX4L52-201ENST00000549363 777 ntBASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 NPM1P47-201ENST00000560843 856 ntBASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 RNU4-89P-201ENST00000607443 133 ntBASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 AC023813.4-201ENST00000607580 580 ntBASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 AL445423.1-201ENST00000609941 536 ntBASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 MLECP1-201ENST00000615893 709 ntBASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 AC091905.1-201ENST00000624400 311 ntBASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 AC090506.2-201ENST00000624521 419 ntBASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 MIR7641-1-201ENST00000627518 61 ntBASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TRAV27A0A087WT01 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 AC027287.1-201ENST00000553115 1453 ntBASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 CR382285.2-201ENST00000624662 1495 ntBASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 LINC00561-201ENST00000565815 2738 ntBASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 AC107021.2-201ENST00000567714 2095 ntBASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 RNU1-18P-201ENST00000363062 164 ntBASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 ATP5F1P4-201ENST00000397288 746 ntBASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 AMZ2P2-201ENST00000406819 1057 ntBASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 TPT1P13-201ENST00000449760 499 ntBASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 AC006463.2-201ENST00000473326 348 ntBASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 AC110792.1-201ENST00000491826 472 ntBASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 AL390816.3-201ENST00000604527 1066 ntBASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 AL158062.1-201ENST00000619632 745 ntBASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 OR52H1-202ENST00000641796 1061 ntBASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
TRAV27A0A087WT01 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TRAV27A0A087WT01 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRAV27A0A087WT01 MAPK10-373ENST00000641983 6772 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 153.5 ms