Protein–RNA interactions for Protein: Q9Z1J2

Nek4, Serine/threonine-protein kinase Nek4, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek4Q9Z1J2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nek4Q9Z1J2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nek4Q9Z1J2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nek4Q9Z1J2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.2■□□□□ 0.82
Nek4Q9Z1J2 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.2■□□□□ 0.82
Nek4Q9Z1J2 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.2■□□□□ 0.82
Nek4Q9Z1J2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nek4Q9Z1J2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nek4Q9Z1J2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nek4Q9Z1J2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nek4Q9Z1J2 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nek4Q9Z1J2 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nek4Q9Z1J2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nek4Q9Z1J2 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nek4Q9Z1J2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nek4Q9Z1J2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nek4Q9Z1J2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nek4Q9Z1J2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nek4Q9Z1J2 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Nek4Q9Z1J2 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nek4Q9Z1J2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nek4Q9Z1J2 Gfra2-202ENSMUST00000227633 1480 ntBASIC20.19■□□□□ 0.82
Nek4Q9Z1J2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nek4Q9Z1J2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nek4Q9Z1J2 Gm27463-201ENSMUST00000183569 57 ntBASIC20.19■□□□□ 0.82
Nek4Q9Z1J2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nek4Q9Z1J2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nek4Q9Z1J2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nek4Q9Z1J2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Nek4Q9Z1J2 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
Nek4Q9Z1J2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nek4Q9Z1J2 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nek4Q9Z1J2 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
Nek4Q9Z1J2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nek4Q9Z1J2 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC20.18■□□□□ 0.82
Nek4Q9Z1J2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nek4Q9Z1J2 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nek4Q9Z1J2 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Nek4Q9Z1J2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nek4Q9Z1J2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC20.18■□□□□ 0.82
Nek4Q9Z1J2 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Nek4Q9Z1J2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nek4Q9Z1J2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Nek4Q9Z1J2 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.18■□□□□ 0.82
Nek4Q9Z1J2 Gm5417-201ENSMUST00000079706 384 ntBASIC20.18■□□□□ 0.82
Nek4Q9Z1J2 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nek4Q9Z1J2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nek4Q9Z1J2 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nek4Q9Z1J2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Nek4Q9Z1J2 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nek4Q9Z1J2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nek4Q9Z1J2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nek4Q9Z1J2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC20.18■□□□□ 0.82
Nek4Q9Z1J2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nek4Q9Z1J2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Nek4Q9Z1J2 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Nek4Q9Z1J2 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nek4Q9Z1J2 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC20.18■□□□□ 0.82
Nek4Q9Z1J2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nek4Q9Z1J2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nek4Q9Z1J2 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nek4Q9Z1J2 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nek4Q9Z1J2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nek4Q9Z1J2 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nek4Q9Z1J2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.17■□□□□ 0.82
Nek4Q9Z1J2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nek4Q9Z1J2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.17■□□□□ 0.82
Nek4Q9Z1J2 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Nek4Q9Z1J2 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nek4Q9Z1J2 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nek4Q9Z1J2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nek4Q9Z1J2 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nek4Q9Z1J2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nek4Q9Z1J2 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nek4Q9Z1J2 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC20.16■□□□□ 0.82
Nek4Q9Z1J2 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC20.16■□□□□ 0.82
Nek4Q9Z1J2 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nek4Q9Z1J2 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nek4Q9Z1J2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nek4Q9Z1J2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nek4Q9Z1J2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nek4Q9Z1J2 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nek4Q9Z1J2 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nek4Q9Z1J2 Phf7-203ENSMUST00000226565 1971 ntBASIC20.16■□□□□ 0.82
Nek4Q9Z1J2 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nek4Q9Z1J2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.16■□□□□ 0.82
Nek4Q9Z1J2 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nek4Q9Z1J2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nek4Q9Z1J2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nek4Q9Z1J2 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Nek4Q9Z1J2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
Nek4Q9Z1J2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Nek4Q9Z1J2 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Nek4Q9Z1J2 Dancr-204ENSMUST00000132389 2347 ntBASIC20.16■□□□□ 0.82
Nek4Q9Z1J2 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nek4Q9Z1J2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nek4Q9Z1J2 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nek4Q9Z1J2 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nek4Q9Z1J2 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nek4Q9Z1J2 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms