Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
Sf3b3Q921M3 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sf3b3Q921M3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Sf3b3Q921M3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.92■□□□□ 0.78
Sf3b3Q921M3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.92■□□□□ 0.78
Sf3b3Q921M3 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3b3Q921M3 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3b3Q921M3 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3b3Q921M3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
Sf3b3Q921M3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3b3Q921M3 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC19.91■□□□□ 0.78
Sf3b3Q921M3 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3b3Q921M3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Sf3b3Q921M3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3b3Q921M3 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC19.91■□□□□ 0.78
Sf3b3Q921M3 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3b3Q921M3 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3b3Q921M3 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Sf3b3Q921M3 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3b3Q921M3 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3b3Q921M3 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC19.91■□□□□ 0.78
Sf3b3Q921M3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3b3Q921M3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3b3Q921M3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3b3Q921M3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sf3b3Q921M3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sf3b3Q921M3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sf3b3Q921M3 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sf3b3Q921M3 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sf3b3Q921M3 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sf3b3Q921M3 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sf3b3Q921M3 Gm12497-201ENSMUST00000138778 237 ntBASIC19.9■□□□□ 0.78
Sf3b3Q921M3 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC19.9■□□□□ 0.78
Sf3b3Q921M3 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC19.9■□□□□ 0.78
Sf3b3Q921M3 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC19.9■□□□□ 0.78
Sf3b3Q921M3 Gm37584-201ENSMUST00000193595 1290 ntBASIC19.9■□□□□ 0.78
Sf3b3Q921M3 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC19.9■□□□□ 0.78
Sf3b3Q921M3 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Sf3b3Q921M3 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sf3b3Q921M3 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Sf3b3Q921M3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sf3b3Q921M3 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Sf3b3Q921M3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Sf3b3Q921M3 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sf3b3Q921M3 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sf3b3Q921M3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Sf3b3Q921M3 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC19.89■□□□□ 0.77
Sf3b3Q921M3 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC19.89■□□□□ 0.77
Sf3b3Q921M3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Sf3b3Q921M3 AC154527.4-201ENSMUST00000224364 1667 ntBASIC19.89■□□□□ 0.77
Sf3b3Q921M3 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Sf3b3Q921M3 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sf3b3Q921M3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sf3b3Q921M3 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sf3b3Q921M3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3b3Q921M3 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3b3Q921M3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3b3Q921M3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3b3Q921M3 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3b3Q921M3 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.88■□□□□ 0.77
Sf3b3Q921M3 Gm4459-201ENSMUST00000118750 468 ntBASIC19.88■□□□□ 0.77
Sf3b3Q921M3 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3b3Q921M3 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3b3Q921M3 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC19.88■□□□□ 0.77
Sf3b3Q921M3 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3b3Q921M3 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3b3Q921M3 Gm37935-201ENSMUST00000192012 982 ntBASIC19.88■□□□□ 0.77
Sf3b3Q921M3 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC19.88■□□□□ 0.77
Sf3b3Q921M3 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3b3Q921M3 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Sf3b3Q921M3 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3b3Q921M3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3b3Q921M3 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3b3Q921M3 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
Sf3b3Q921M3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sf3b3Q921M3 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3b3Q921M3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Sf3b3Q921M3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3b3Q921M3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3b3Q921M3 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3b3Q921M3 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3b3Q921M3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3b3Q921M3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.87■□□□□ 0.77
Sf3b3Q921M3 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3b3Q921M3 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3b3Q921M3 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC19.87■□□□□ 0.77
Sf3b3Q921M3 Gm11780-201ENSMUST00000136880 516 ntBASIC19.87■□□□□ 0.77
Sf3b3Q921M3 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC19.87■□□□□ 0.77
Sf3b3Q921M3 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3b3Q921M3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
Sf3b3Q921M3 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC19.87■□□□□ 0.77
Sf3b3Q921M3 Gm5364-201ENSMUST00000216789 889 ntBASIC19.87■□□□□ 0.77
Sf3b3Q921M3 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3b3Q921M3 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sf3b3Q921M3 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.87■□□□□ 0.77
Sf3b3Q921M3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Sf3b3Q921M3 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3b3Q921M3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3b3Q921M3 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sf3b3Q921M3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms