Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha11Q91Y19 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha11Q91Y19 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.44■□□□□ 0.38
Pcdha11Q91Y19 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.44■□□□□ 0.38
Pcdha11Q91Y19 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Pcdha11Q91Y19 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcdha11Q91Y19 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha11Q91Y19 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha11Q91Y19 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha11Q91Y19 Gm45328-201ENSMUST00000210942 917 ntBASIC17.44■□□□□ 0.38
Pcdha11Q91Y19 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
Pcdha11Q91Y19 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha11Q91Y19 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha11Q91Y19 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Pcdha11Q91Y19 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha11Q91Y19 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha11Q91Y19 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Pcdha11Q91Y19 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Pcdha11Q91Y19 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha11Q91Y19 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha11Q91Y19 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Pcdha11Q91Y19 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha11Q91Y19 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha11Q91Y19 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha11Q91Y19 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha11Q91Y19 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha11Q91Y19 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha11Q91Y19 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.43■□□□□ 0.38
Pcdha11Q91Y19 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.43■□□□□ 0.38
Pcdha11Q91Y19 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha11Q91Y19 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.43■□□□□ 0.38
Pcdha11Q91Y19 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.43■□□□□ 0.38
Pcdha11Q91Y19 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha11Q91Y19 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha11Q91Y19 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha11Q91Y19 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha11Q91Y19 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha11Q91Y19 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha11Q91Y19 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha11Q91Y19 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha11Q91Y19 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha11Q91Y19 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha11Q91Y19 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha11Q91Y19 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha11Q91Y19 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha11Q91Y19 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha11Q91Y19 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha11Q91Y19 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha11Q91Y19 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha11Q91Y19 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha11Q91Y19 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdha11Q91Y19 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha11Q91Y19 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha11Q91Y19 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha11Q91Y19 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha11Q91Y19 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.41■□□□□ 0.38
Pcdha11Q91Y19 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha11Q91Y19 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha11Q91Y19 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha11Q91Y19 Gm10819-201ENSMUST00000099988 561 ntBASIC17.41■□□□□ 0.38
Pcdha11Q91Y19 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha11Q91Y19 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha11Q91Y19 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha11Q91Y19 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha11Q91Y19 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha11Q91Y19 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdha11Q91Y19 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pcdha11Q91Y19 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha11Q91Y19 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha11Q91Y19 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha11Q91Y19 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Pcdha11Q91Y19 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha11Q91Y19 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha11Q91Y19 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.4■□□□□ 0.38
Pcdha11Q91Y19 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha11Q91Y19 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pcdha11Q91Y19 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha11Q91Y19 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha11Q91Y19 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha11Q91Y19 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha11Q91Y19 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Pcdha11Q91Y19 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha11Q91Y19 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdha11Q91Y19 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha11Q91Y19 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdha11Q91Y19 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdha11Q91Y19 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha11Q91Y19 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Pcdha11Q91Y19 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.4■□□□□ 0.38
Pcdha11Q91Y19 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha11Q91Y19 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdha11Q91Y19 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdha11Q91Y19 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Pcdha11Q91Y19 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdha11Q91Y19 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdha11Q91Y19 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
Pcdha11Q91Y19 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha11Q91Y19 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha11Q91Y19 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha11Q91Y19 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms