Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Nudcd3Q8R1N4 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Nudcd3Q8R1N4 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Nudcd3Q8R1N4 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nudcd3Q8R1N4 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nudcd3Q8R1N4 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nudcd3Q8R1N4 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Nudcd3Q8R1N4 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nudcd3Q8R1N4 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nudcd3Q8R1N4 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nudcd3Q8R1N4 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nudcd3Q8R1N4 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nudcd3Q8R1N4 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nudcd3Q8R1N4 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nudcd3Q8R1N4 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nudcd3Q8R1N4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nudcd3Q8R1N4 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nudcd3Q8R1N4 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nudcd3Q8R1N4 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nudcd3Q8R1N4 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nudcd3Q8R1N4 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Nudcd3Q8R1N4 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nudcd3Q8R1N4 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nudcd3Q8R1N4 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nudcd3Q8R1N4 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nudcd3Q8R1N4 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nudcd3Q8R1N4 Gm13158-201ENSMUST00000122007 736 ntBASIC16.63■□□□□ 0.25
Nudcd3Q8R1N4 Gm24841-201ENSMUST00000158676 357 ntBASIC16.63■□□□□ 0.25
Nudcd3Q8R1N4 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nudcd3Q8R1N4 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.63■□□□□ 0.25
Nudcd3Q8R1N4 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nudcd3Q8R1N4 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nudcd3Q8R1N4 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nudcd3Q8R1N4 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nudcd3Q8R1N4 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nudcd3Q8R1N4 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nudcd3Q8R1N4 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nudcd3Q8R1N4 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nudcd3Q8R1N4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nudcd3Q8R1N4 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nudcd3Q8R1N4 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Nudcd3Q8R1N4 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.62■□□□□ 0.25
Nudcd3Q8R1N4 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nudcd3Q8R1N4 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Nudcd3Q8R1N4 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nudcd3Q8R1N4 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Nudcd3Q8R1N4 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nudcd3Q8R1N4 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Nudcd3Q8R1N4 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nudcd3Q8R1N4 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Nudcd3Q8R1N4 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nudcd3Q8R1N4 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nudcd3Q8R1N4 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nudcd3Q8R1N4 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nudcd3Q8R1N4 Gm27405-201ENSMUST00000184201 112 ntBASIC16.62■□□□□ 0.25
Nudcd3Q8R1N4 Gm10517-202ENSMUST00000192970 758 ntBASIC16.62■□□□□ 0.25
Nudcd3Q8R1N4 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.62■□□□□ 0.25
Nudcd3Q8R1N4 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Nudcd3Q8R1N4 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nudcd3Q8R1N4 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nudcd3Q8R1N4 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Nudcd3Q8R1N4 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nudcd3Q8R1N4 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nudcd3Q8R1N4 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nudcd3Q8R1N4 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nudcd3Q8R1N4 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nudcd3Q8R1N4 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nudcd3Q8R1N4 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.61■□□□□ 0.25
Nudcd3Q8R1N4 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Nudcd3Q8R1N4 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nudcd3Q8R1N4 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nudcd3Q8R1N4 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nudcd3Q8R1N4 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.61■□□□□ 0.25
Nudcd3Q8R1N4 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nudcd3Q8R1N4 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nudcd3Q8R1N4 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.61■□□□□ 0.25
Nudcd3Q8R1N4 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.61■□□□□ 0.25
Nudcd3Q8R1N4 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.61■□□□□ 0.25
Nudcd3Q8R1N4 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nudcd3Q8R1N4 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nudcd3Q8R1N4 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nudcd3Q8R1N4 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nudcd3Q8R1N4 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nudcd3Q8R1N4 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nudcd3Q8R1N4 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Nudcd3Q8R1N4 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nudcd3Q8R1N4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nudcd3Q8R1N4 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nudcd3Q8R1N4 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.61■□□□□ 0.25
Nudcd3Q8R1N4 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nudcd3Q8R1N4 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nudcd3Q8R1N4 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nudcd3Q8R1N4 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Nudcd3Q8R1N4 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nudcd3Q8R1N4 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nudcd3Q8R1N4 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nudcd3Q8R1N4 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nudcd3Q8R1N4 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
Nudcd3Q8R1N4 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Nudcd3Q8R1N4 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms