Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
CroccQ8CJ40 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CroccQ8CJ40 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CroccQ8CJ40 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CroccQ8CJ40 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CroccQ8CJ40 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.86■□□□□ 0.13
CroccQ8CJ40 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CroccQ8CJ40 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CroccQ8CJ40 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CroccQ8CJ40 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.86■□□□□ 0.13
CroccQ8CJ40 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.86■□□□□ 0.13
CroccQ8CJ40 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CroccQ8CJ40 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CroccQ8CJ40 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CroccQ8CJ40 Gm10013-201ENSMUST00000106074 672 ntBASIC15.86■□□□□ 0.13
CroccQ8CJ40 Gm37722-201ENSMUST00000193757 208 ntBASIC15.86■□□□□ 0.13
CroccQ8CJ40 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CroccQ8CJ40 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
CroccQ8CJ40 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CroccQ8CJ40 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CroccQ8CJ40 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CroccQ8CJ40 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CroccQ8CJ40 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.86■□□□□ 0.13
CroccQ8CJ40 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CroccQ8CJ40 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CroccQ8CJ40 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CroccQ8CJ40 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CroccQ8CJ40 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CroccQ8CJ40 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CroccQ8CJ40 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CroccQ8CJ40 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CroccQ8CJ40 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CroccQ8CJ40 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CroccQ8CJ40 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CroccQ8CJ40 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CroccQ8CJ40 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CroccQ8CJ40 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CroccQ8CJ40 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CroccQ8CJ40 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.85■□□□□ 0.13
CroccQ8CJ40 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CroccQ8CJ40 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
CroccQ8CJ40 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CroccQ8CJ40 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CroccQ8CJ40 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CroccQ8CJ40 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.85■□□□□ 0.13
CroccQ8CJ40 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CroccQ8CJ40 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CroccQ8CJ40 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CroccQ8CJ40 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CroccQ8CJ40 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.85■□□□□ 0.13
CroccQ8CJ40 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CroccQ8CJ40 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.85■□□□□ 0.13
CroccQ8CJ40 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.85■□□□□ 0.13
CroccQ8CJ40 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CroccQ8CJ40 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CroccQ8CJ40 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CroccQ8CJ40 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CroccQ8CJ40 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CroccQ8CJ40 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CroccQ8CJ40 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CroccQ8CJ40 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CroccQ8CJ40 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CroccQ8CJ40 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CroccQ8CJ40 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CroccQ8CJ40 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CroccQ8CJ40 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CroccQ8CJ40 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CroccQ8CJ40 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CroccQ8CJ40 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CroccQ8CJ40 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CroccQ8CJ40 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CroccQ8CJ40 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.84■□□□□ 0.13
CroccQ8CJ40 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CroccQ8CJ40 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CroccQ8CJ40 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CroccQ8CJ40 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.84■□□□□ 0.13
CroccQ8CJ40 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CroccQ8CJ40 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CroccQ8CJ40 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CroccQ8CJ40 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
CroccQ8CJ40 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
CroccQ8CJ40 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CroccQ8CJ40 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CroccQ8CJ40 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CroccQ8CJ40 Gm5587-201ENSMUST00000206270 674 ntBASIC15.83■□□□□ 0.12
CroccQ8CJ40 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CroccQ8CJ40 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CroccQ8CJ40 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CroccQ8CJ40 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CroccQ8CJ40 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CroccQ8CJ40 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CroccQ8CJ40 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.83■□□□□ 0.12
CroccQ8CJ40 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CroccQ8CJ40 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CroccQ8CJ40 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CroccQ8CJ40 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CroccQ8CJ40 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CroccQ8CJ40 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CroccQ8CJ40 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CroccQ8CJ40 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms