Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim6Q8BGE7 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim6Q8BGE7 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim6Q8BGE7 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim6Q8BGE7 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Trim6Q8BGE7 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim6Q8BGE7 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trim6Q8BGE7 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim6Q8BGE7 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trim6Q8BGE7 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim6Q8BGE7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.65■□□□□ 0.42
Trim6Q8BGE7 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.65■□□□□ 0.42
Trim6Q8BGE7 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim6Q8BGE7 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim6Q8BGE7 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim6Q8BGE7 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim6Q8BGE7 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim6Q8BGE7 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim6Q8BGE7 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim6Q8BGE7 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim6Q8BGE7 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim6Q8BGE7 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim6Q8BGE7 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim6Q8BGE7 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trim6Q8BGE7 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim6Q8BGE7 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim6Q8BGE7 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.64■□□□□ 0.41
Trim6Q8BGE7 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim6Q8BGE7 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim6Q8BGE7 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim6Q8BGE7 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim6Q8BGE7 Gm10517-202ENSMUST00000192970 758 ntBASIC17.64■□□□□ 0.41
Trim6Q8BGE7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim6Q8BGE7 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim6Q8BGE7 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim6Q8BGE7 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Trim6Q8BGE7 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim6Q8BGE7 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim6Q8BGE7 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim6Q8BGE7 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim6Q8BGE7 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim6Q8BGE7 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim6Q8BGE7 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim6Q8BGE7 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim6Q8BGE7 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim6Q8BGE7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim6Q8BGE7 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trim6Q8BGE7 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim6Q8BGE7 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim6Q8BGE7 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.63■□□□□ 0.41
Trim6Q8BGE7 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim6Q8BGE7 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim6Q8BGE7 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.63■□□□□ 0.41
Trim6Q8BGE7 Gm37292-201ENSMUST00000192062 758 ntBASIC17.63■□□□□ 0.41
Trim6Q8BGE7 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim6Q8BGE7 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim6Q8BGE7 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim6Q8BGE7 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim6Q8BGE7 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trim6Q8BGE7 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim6Q8BGE7 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim6Q8BGE7 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim6Q8BGE7 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim6Q8BGE7 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim6Q8BGE7 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trim6Q8BGE7 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim6Q8BGE7 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim6Q8BGE7 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim6Q8BGE7 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim6Q8BGE7 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim6Q8BGE7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.62■□□□□ 0.41
Trim6Q8BGE7 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.62■□□□□ 0.41
Trim6Q8BGE7 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.62■□□□□ 0.41
Trim6Q8BGE7 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim6Q8BGE7 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim6Q8BGE7 Gm27275-201ENSMUST00000184318 272 ntBASIC17.62■□□□□ 0.41
Trim6Q8BGE7 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim6Q8BGE7 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim6Q8BGE7 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim6Q8BGE7 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim6Q8BGE7 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim6Q8BGE7 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim6Q8BGE7 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim6Q8BGE7 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim6Q8BGE7 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Trim6Q8BGE7 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim6Q8BGE7 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trim6Q8BGE7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Trim6Q8BGE7 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim6Q8BGE7 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim6Q8BGE7 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trim6Q8BGE7 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.61■□□□□ 0.41
Trim6Q8BGE7 Gm24841-201ENSMUST00000158676 357 ntBASIC17.61■□□□□ 0.41
Trim6Q8BGE7 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim6Q8BGE7 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.61■□□□□ 0.41
Trim6Q8BGE7 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim6Q8BGE7 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trim6Q8BGE7 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim6Q8BGE7 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim6Q8BGE7 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms