Protein–RNA interactions for Protein: Q80XJ2

Rnf168, E3 ubiquitin-protein ligase RNF168, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf168Q80XJ2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf168Q80XJ2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rnf168Q80XJ2 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf168Q80XJ2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf168Q80XJ2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf168Q80XJ2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rnf168Q80XJ2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf168Q80XJ2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf168Q80XJ2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rnf168Q80XJ2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf168Q80XJ2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf168Q80XJ2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf168Q80XJ2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf168Q80XJ2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Rnf168Q80XJ2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf168Q80XJ2 Gm11336-201ENSMUST00000118168 334 ntBASIC17.67■□□□□ 0.42
Rnf168Q80XJ2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf168Q80XJ2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.67■□□□□ 0.42
Rnf168Q80XJ2 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.67■□□□□ 0.42
Rnf168Q80XJ2 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.67■□□□□ 0.42
Rnf168Q80XJ2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rnf168Q80XJ2 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.67■□□□□ 0.42
Rnf168Q80XJ2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf168Q80XJ2 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf168Q80XJ2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rnf168Q80XJ2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf168Q80XJ2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf168Q80XJ2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf168Q80XJ2 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rnf168Q80XJ2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf168Q80XJ2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf168Q80XJ2 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Rnf168Q80XJ2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf168Q80XJ2 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rnf168Q80XJ2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf168Q80XJ2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.66■□□□□ 0.42
Rnf168Q80XJ2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf168Q80XJ2 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf168Q80XJ2 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.66■□□□□ 0.42
Rnf168Q80XJ2 Gm18115-201ENSMUST00000221209 621 ntBASIC17.66■□□□□ 0.42
Rnf168Q80XJ2 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf168Q80XJ2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf168Q80XJ2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf168Q80XJ2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.66■□□□□ 0.42
Rnf168Q80XJ2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rnf168Q80XJ2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf168Q80XJ2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf168Q80XJ2 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf168Q80XJ2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf168Q80XJ2 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf168Q80XJ2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf168Q80XJ2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rnf168Q80XJ2 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf168Q80XJ2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf168Q80XJ2 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf168Q80XJ2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.65■□□□□ 0.42
Rnf168Q80XJ2 Gm24589-201ENSMUST00000116692 94 ntBASIC17.65■□□□□ 0.42
Rnf168Q80XJ2 Gm13186-201ENSMUST00000118031 316 ntBASIC17.65■□□□□ 0.42
Rnf168Q80XJ2 Gm15794-201ENSMUST00000120182 631 ntBASIC17.65■□□□□ 0.42
Rnf168Q80XJ2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.65■□□□□ 0.42
Rnf168Q80XJ2 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf168Q80XJ2 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf168Q80XJ2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf168Q80XJ2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf168Q80XJ2 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf168Q80XJ2 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf168Q80XJ2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf168Q80XJ2 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf168Q80XJ2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf168Q80XJ2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf168Q80XJ2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf168Q80XJ2 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rnf168Q80XJ2 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rnf168Q80XJ2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.64■□□□□ 0.42
Rnf168Q80XJ2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf168Q80XJ2 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf168Q80XJ2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf168Q80XJ2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Rnf168Q80XJ2 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf168Q80XJ2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.64■□□□□ 0.41
Rnf168Q80XJ2 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Rnf168Q80XJ2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.64■□□□□ 0.41
Rnf168Q80XJ2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf168Q80XJ2 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rnf168Q80XJ2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf168Q80XJ2 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rnf168Q80XJ2 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rnf168Q80XJ2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.64■□□□□ 0.41
Rnf168Q80XJ2 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf168Q80XJ2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rnf168Q80XJ2 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rnf168Q80XJ2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf168Q80XJ2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf168Q80XJ2 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rnf168Q80XJ2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.64■□□□□ 0.41
Rnf168Q80XJ2 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf168Q80XJ2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf168Q80XJ2 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf168Q80XJ2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf168Q80XJ2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms