Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Notch3Q61982 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC12.72□□□□□ -0.37
Notch3Q61982 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Notch3Q61982 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Notch3Q61982 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Notch3Q61982 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.72□□□□□ -0.37
Notch3Q61982 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Notch3Q61982 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Notch3Q61982 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Notch3Q61982 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Notch3Q61982 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Notch3Q61982 Gm18733-201ENSMUST00000173950 856 ntBASIC12.72□□□□□ -0.37
Notch3Q61982 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Notch3Q61982 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Notch3Q61982 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Notch3Q61982 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Notch3Q61982 Zcchc6-207ENSMUST00000225576 2499 ntBASIC12.72□□□□□ -0.37
Notch3Q61982 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Notch3Q61982 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Notch3Q61982 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Notch3Q61982 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Notch3Q61982 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Notch3Q61982 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Notch3Q61982 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Notch3Q61982 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC12.72□□□□□ -0.37
Notch3Q61982 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Notch3Q61982 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Notch3Q61982 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Notch3Q61982 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Notch3Q61982 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Notch3Q61982 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Notch3Q61982 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Notch3Q61982 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Notch3Q61982 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Notch3Q61982 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Notch3Q61982 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Notch3Q61982 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Notch3Q61982 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Notch3Q61982 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC12.71□□□□□ -0.37
Notch3Q61982 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.71□□□□□ -0.37
Notch3Q61982 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Notch3Q61982 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Notch3Q61982 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Notch3Q61982 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Notch3Q61982 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.71□□□□□ -0.37
Notch3Q61982 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.71□□□□□ -0.37
Notch3Q61982 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Notch3Q61982 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Notch3Q61982 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.71□□□□□ -0.37
Notch3Q61982 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Notch3Q61982 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Notch3Q61982 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Notch3Q61982 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Notch3Q61982 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Notch3Q61982 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Notch3Q61982 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Notch3Q61982 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.71□□□□□ -0.37
Notch3Q61982 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Notch3Q61982 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Notch3Q61982 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Notch3Q61982 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Notch3Q61982 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Notch3Q61982 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.71□□□□□ -0.38
Notch3Q61982 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Notch3Q61982 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.71□□□□□ -0.38
Notch3Q61982 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Notch3Q61982 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Notch3Q61982 Gm43347-201ENSMUST00000200226 580 ntBASIC12.71□□□□□ -0.38
Notch3Q61982 AW822252-206ENSMUST00000208904 237 ntBASIC12.71□□□□□ -0.38
Notch3Q61982 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Notch3Q61982 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Notch3Q61982 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Notch3Q61982 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Notch3Q61982 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Notch3Q61982 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Notch3Q61982 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Notch3Q61982 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Notch3Q61982 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Notch3Q61982 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Notch3Q61982 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Notch3Q61982 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Notch3Q61982 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Notch3Q61982 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Notch3Q61982 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Notch3Q61982 Gm6623-201ENSMUST00000173570 544 ntBASIC12.7□□□□□ -0.38
Notch3Q61982 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.7□□□□□ -0.38
Notch3Q61982 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Notch3Q61982 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.7□□□□□ -0.38
Notch3Q61982 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC12.7□□□□□ -0.38
Notch3Q61982 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Notch3Q61982 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Notch3Q61982 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Notch3Q61982 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Notch3Q61982 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Notch3Q61982 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Notch3Q61982 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Notch3Q61982 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Notch3Q61982 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Notch3Q61982 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC12.7□□□□□ -0.38
Notch3Q61982 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms