Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.13■□□□□ 0.65
Rc3h1Q4VGL6 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rc3h1Q4VGL6 Gm44430-201ENSMUST00000203376 995 ntBASIC19.13■□□□□ 0.65
Rc3h1Q4VGL6 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.13■□□□□ 0.65
Rc3h1Q4VGL6 Birc2-201ENSMUST00000054878 378 ntBASIC19.13■□□□□ 0.65
Rc3h1Q4VGL6 Gm7461-201ENSMUST00000058918 827 ntBASIC19.13■□□□□ 0.65
Rc3h1Q4VGL6 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rc3h1Q4VGL6 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.13■□□□□ 0.65
Rc3h1Q4VGL6 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rc3h1Q4VGL6 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rc3h1Q4VGL6 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rc3h1Q4VGL6 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rc3h1Q4VGL6 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rc3h1Q4VGL6 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rc3h1Q4VGL6 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rc3h1Q4VGL6 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rc3h1Q4VGL6 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rc3h1Q4VGL6 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rc3h1Q4VGL6 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rc3h1Q4VGL6 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rc3h1Q4VGL6 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rc3h1Q4VGL6 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Rc3h1Q4VGL6 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rc3h1Q4VGL6 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rc3h1Q4VGL6 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Rc3h1Q4VGL6 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rc3h1Q4VGL6 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rc3h1Q4VGL6 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.12■□□□□ 0.65
Rc3h1Q4VGL6 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rc3h1Q4VGL6 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rc3h1Q4VGL6 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rc3h1Q4VGL6 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rc3h1Q4VGL6 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rc3h1Q4VGL6 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.12■□□□□ 0.65
Rc3h1Q4VGL6 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rc3h1Q4VGL6 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rc3h1Q4VGL6 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC19.11■□□□□ 0.65
Rc3h1Q4VGL6 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Rc3h1Q4VGL6 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rc3h1Q4VGL6 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.11■□□□□ 0.65
Rc3h1Q4VGL6 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rc3h1Q4VGL6 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rc3h1Q4VGL6 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.11■□□□□ 0.65
Rc3h1Q4VGL6 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Rc3h1Q4VGL6 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.11■□□□□ 0.65
Rc3h1Q4VGL6 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rc3h1Q4VGL6 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rc3h1Q4VGL6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Rc3h1Q4VGL6 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rc3h1Q4VGL6 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Rc3h1Q4VGL6 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rc3h1Q4VGL6 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.11■□□□□ 0.65
Rc3h1Q4VGL6 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rc3h1Q4VGL6 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rc3h1Q4VGL6 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Rc3h1Q4VGL6 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rc3h1Q4VGL6 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rc3h1Q4VGL6 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rc3h1Q4VGL6 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rc3h1Q4VGL6 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Rc3h1Q4VGL6 Gm13312-201ENSMUST00000119631 718 ntBASIC19.1■□□□□ 0.65
Rc3h1Q4VGL6 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rc3h1Q4VGL6 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rc3h1Q4VGL6 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.1■□□□□ 0.65
Rc3h1Q4VGL6 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rc3h1Q4VGL6 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rc3h1Q4VGL6 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rc3h1Q4VGL6 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Rc3h1Q4VGL6 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rc3h1Q4VGL6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rc3h1Q4VGL6 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rc3h1Q4VGL6 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rc3h1Q4VGL6 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.09■□□□□ 0.65
Rc3h1Q4VGL6 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rc3h1Q4VGL6 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.09■□□□□ 0.65
Rc3h1Q4VGL6 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rc3h1Q4VGL6 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rc3h1Q4VGL6 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rc3h1Q4VGL6 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.09■□□□□ 0.65
Rc3h1Q4VGL6 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rc3h1Q4VGL6 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rc3h1Q4VGL6 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rc3h1Q4VGL6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rc3h1Q4VGL6 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rc3h1Q4VGL6 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rc3h1Q4VGL6 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rc3h1Q4VGL6 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.08■□□□□ 0.65
Rc3h1Q4VGL6 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rc3h1Q4VGL6 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Rc3h1Q4VGL6 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rc3h1Q4VGL6 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.08■□□□□ 0.65
Rc3h1Q4VGL6 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Rc3h1Q4VGL6 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rc3h1Q4VGL6 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rc3h1Q4VGL6 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Rc3h1Q4VGL6 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rc3h1Q4VGL6 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.65
Rc3h1Q4VGL6 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.08■□□□□ 0.64
Rc3h1Q4VGL6 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.08■□□□□ 0.64
Rc3h1Q4VGL6 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms