Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fndc4Q3TR08 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fndc4Q3TR08 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Fndc4Q3TR08 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fndc4Q3TR08 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fndc4Q3TR08 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.18□□□□□ -0.14
Fndc4Q3TR08 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fndc4Q3TR08 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fndc4Q3TR08 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fndc4Q3TR08 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fndc4Q3TR08 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fndc4Q3TR08 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Fndc4Q3TR08 Gm10698-201ENSMUST00000182663 604 ntBASIC14.17□□□□□ -0.14
Fndc4Q3TR08 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.17□□□□□ -0.14
Fndc4Q3TR08 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fndc4Q3TR08 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Fndc4Q3TR08 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.17□□□□□ -0.14
Fndc4Q3TR08 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Fndc4Q3TR08 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc4Q3TR08 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc4Q3TR08 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc4Q3TR08 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Fndc4Q3TR08 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Fndc4Q3TR08 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc4Q3TR08 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc4Q3TR08 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc4Q3TR08 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc4Q3TR08 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.16□□□□□ -0.14
Fndc4Q3TR08 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.16□□□□□ -0.14
Fndc4Q3TR08 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc4Q3TR08 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc4Q3TR08 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc4Q3TR08 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc4Q3TR08 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc4Q3TR08 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc4Q3TR08 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc4Q3TR08 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc4Q3TR08 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc4Q3TR08 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc4Q3TR08 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc4Q3TR08 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Fndc4Q3TR08 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Fndc4Q3TR08 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fndc4Q3TR08 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fndc4Q3TR08 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fndc4Q3TR08 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fndc4Q3TR08 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Fndc4Q3TR08 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fndc4Q3TR08 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fndc4Q3TR08 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Fndc4Q3TR08 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fndc4Q3TR08 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.15□□□□□ -0.14
Fndc4Q3TR08 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fndc4Q3TR08 Gm12382-201ENSMUST00000122005 922 ntBASIC14.15□□□□□ -0.14
Fndc4Q3TR08 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Fndc4Q3TR08 Gm37292-201ENSMUST00000192062 758 ntBASIC14.15□□□□□ -0.14
Fndc4Q3TR08 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.15□□□□□ -0.14
Fndc4Q3TR08 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.15□□□□□ -0.14
Fndc4Q3TR08 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fndc4Q3TR08 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fndc4Q3TR08 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fndc4Q3TR08 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fndc4Q3TR08 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fndc4Q3TR08 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fndc4Q3TR08 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fndc4Q3TR08 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Fndc4Q3TR08 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Fndc4Q3TR08 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Fndc4Q3TR08 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Fndc4Q3TR08 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fndc4Q3TR08 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Fndc4Q3TR08 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.14□□□□□ -0.15
Fndc4Q3TR08 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.14□□□□□ -0.15
Fndc4Q3TR08 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Fndc4Q3TR08 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fndc4Q3TR08 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fndc4Q3TR08 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fndc4Q3TR08 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fndc4Q3TR08 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Fndc4Q3TR08 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Fndc4Q3TR08 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.14□□□□□ -0.15
Fndc4Q3TR08 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.14□□□□□ -0.15
Fndc4Q3TR08 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fndc4Q3TR08 Gm22240-201ENSMUST00000175225 82 ntBASIC14.14□□□□□ -0.15
Fndc4Q3TR08 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fndc4Q3TR08 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Fndc4Q3TR08 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Fndc4Q3TR08 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fndc4Q3TR08 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fndc4Q3TR08 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fndc4Q3TR08 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Fndc4Q3TR08 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fndc4Q3TR08 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fndc4Q3TR08 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fndc4Q3TR08 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Fndc4Q3TR08 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Fndc4Q3TR08 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Fndc4Q3TR08 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Fndc4Q3TR08 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fndc4Q3TR08 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms