Protein–RNA interactions for Protein: P97350

Pkp1, Plakophilin-1, mousemouse

Known RBP Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp1P97350 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pkp1P97350 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pkp1P97350 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pkp1P97350 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pkp1P97350 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pkp1P97350 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Pkp1P97350 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pkp1P97350 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pkp1P97350 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pkp1P97350 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pkp1P97350 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pkp1P97350 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pkp1P97350 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Pkp1P97350 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pkp1P97350 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Pkp1P97350 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pkp1P97350 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.4■□□□□ 0.7
Pkp1P97350 Gm18959-201ENSMUST00000208954 655 ntBASIC19.4■□□□□ 0.7
Pkp1P97350 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.4■□□□□ 0.7
Pkp1P97350 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pkp1P97350 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pkp1P97350 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pkp1P97350 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pkp1P97350 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pkp1P97350 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pkp1P97350 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Pkp1P97350 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pkp1P97350 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pkp1P97350 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC19.39■□□□□ 0.7
Pkp1P97350 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.39■□□□□ 0.7
Pkp1P97350 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pkp1P97350 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pkp1P97350 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pkp1P97350 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Pkp1P97350 Mir1668-201ENSMUST00000184114 107 ntBASIC19.39■□□□□ 0.69
Pkp1P97350 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.39■□□□□ 0.69
Pkp1P97350 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.39■□□□□ 0.69
Pkp1P97350 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pkp1P97350 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Pkp1P97350 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pkp1P97350 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pkp1P97350 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pkp1P97350 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pkp1P97350 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pkp1P97350 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pkp1P97350 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pkp1P97350 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Pkp1P97350 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pkp1P97350 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Pkp1P97350 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.38■□□□□ 0.69
Pkp1P97350 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Pkp1P97350 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.38■□□□□ 0.69
Pkp1P97350 Gm18421-201ENSMUST00000204122 625 ntBASIC19.38■□□□□ 0.69
Pkp1P97350 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pkp1P97350 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.38■□□□□ 0.69
Pkp1P97350 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pkp1P97350 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pkp1P97350 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pkp1P97350 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pkp1P97350 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pkp1P97350 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pkp1P97350 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pkp1P97350 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pkp1P97350 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pkp1P97350 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pkp1P97350 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pkp1P97350 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pkp1P97350 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pkp1P97350 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pkp1P97350 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pkp1P97350 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pkp1P97350 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pkp1P97350 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pkp1P97350 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pkp1P97350 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Pkp1P97350 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Pkp1P97350 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Pkp1P97350 Gm11336-201ENSMUST00000118168 334 ntBASIC19.37■□□□□ 0.69
Pkp1P97350 Gm6433-201ENSMUST00000118634 875 ntBASIC19.37■□□□□ 0.69
Pkp1P97350 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.37■□□□□ 0.69
Pkp1P97350 Gm26039-201ENSMUST00000158152 144 ntBASIC19.37■□□□□ 0.69
Pkp1P97350 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.37■□□□□ 0.69
Pkp1P97350 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.37■□□□□ 0.69
Pkp1P97350 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Pkp1P97350 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pkp1P97350 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Pkp1P97350 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pkp1P97350 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pkp1P97350 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pkp1P97350 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pkp1P97350 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pkp1P97350 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pkp1P97350 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pkp1P97350 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pkp1P97350 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pkp1P97350 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pkp1P97350 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pkp1P97350 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pkp1P97350 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Pkp1P97350 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms