Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.42■□□□□ 0.86
CLCN4P51793 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLCN4P51793 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLCN4P51793 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CLCN4P51793 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLCN4P51793 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CLCN4P51793 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.41■□□□□ 0.86
CLCN4P51793 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLCN4P51793 HOMER2P1-201ENST00000455653 964 ntBASIC20.41■□□□□ 0.86
CLCN4P51793 FAM86EP-206ENST00000510506 987 ntBASIC20.41■□□□□ 0.86
CLCN4P51793 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.41■□□□□ 0.86
CLCN4P51793 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.41■□□□□ 0.86
CLCN4P51793 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLCN4P51793 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.41■□□□□ 0.86
CLCN4P51793 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.41■□□□□ 0.86
CLCN4P51793 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.41■□□□□ 0.86
CLCN4P51793 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.41■□□□□ 0.86
CLCN4P51793 AL121956.5-201ENST00000625261 221 ntBASIC20.41■□□□□ 0.86
CLCN4P51793 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CLCN4P51793 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.41■□□□□ 0.86
CLCN4P51793 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.41■□□□□ 0.86
CLCN4P51793 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
CLCN4P51793 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLCN4P51793 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLCN4P51793 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.41■□□□□ 0.86
CLCN4P51793 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.41■□□□□ 0.86
CLCN4P51793 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.41■□□□□ 0.86
CLCN4P51793 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CLCN4P51793 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.41■□□□□ 0.86
CLCN4P51793 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CLCN4P51793 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLCN4P51793 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CLCN4P51793 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CLCN4P51793 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLCN4P51793 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CLCN4P51793 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCN4P51793 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCN4P51793 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCN4P51793 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCN4P51793 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.4■□□□□ 0.86
CLCN4P51793 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCN4P51793 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.4■□□□□ 0.86
CLCN4P51793 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCN4P51793 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.4■□□□□ 0.86
CLCN4P51793 PCED1CP-201ENST00000419887 785 ntBASIC20.4■□□□□ 0.86
CLCN4P51793 AC009947.2-201ENST00000444014 672 ntBASIC20.4■□□□□ 0.86
CLCN4P51793 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLCN4P51793 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.4■□□□□ 0.86
CLCN4P51793 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCN4P51793 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.4■□□□□ 0.86
CLCN4P51793 AP003041.3-201ENST00000527151 707 ntBASIC20.4■□□□□ 0.86
CLCN4P51793 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.4■□□□□ 0.86
CLCN4P51793 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.4■□□□□ 0.86
CLCN4P51793 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.4■□□□□ 0.86
CLCN4P51793 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.4■□□□□ 0.86
CLCN4P51793 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CLCN4P51793 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLCN4P51793 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLCN4P51793 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CLCN4P51793 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLCN4P51793 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCN4P51793 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCN4P51793 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.39■□□□□ 0.85
CLCN4P51793 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLCN4P51793 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLCN4P51793 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.39■□□□□ 0.85
CLCN4P51793 AL441883.1-201ENST00000566170 1045 ntBASIC20.39■□□□□ 0.85
CLCN4P51793 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.39■□□□□ 0.85
CLCN4P51793 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.39■□□□□ 0.85
CLCN4P51793 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.39■□□□□ 0.85
CLCN4P51793 AL023973.1-201ENST00000624619 620 ntBASIC20.39■□□□□ 0.85
CLCN4P51793 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
CLCN4P51793 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCN4P51793 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
CLCN4P51793 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCN4P51793 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
CLCN4P51793 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCN4P51793 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCN4P51793 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.38■□□□□ 0.85
CLCN4P51793 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.38■□□□□ 0.85
CLCN4P51793 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CLCN4P51793 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLCN4P51793 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCN4P51793 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.38■□□□□ 0.85
CLCN4P51793 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
CLCN4P51793 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCN4P51793 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCN4P51793 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.38■□□□□ 0.85
CLCN4P51793 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.38■□□□□ 0.85
CLCN4P51793 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCN4P51793 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.38■□□□□ 0.85
CLCN4P51793 AC140113.3-201ENST00000605663 199 ntBASIC20.38■□□□□ 0.85
CLCN4P51793 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
CLCN4P51793 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCN4P51793 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.38■□□□□ 0.85
CLCN4P51793 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.38■□□□□ 0.85
CLCN4P51793 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCN4P51793 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CLCN4P51793 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLCN4P51793 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms