Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cldn1O88551 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cldn1O88551 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cldn1O88551 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cldn1O88551 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Cldn1O88551 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn1O88551 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn1O88551 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn1O88551 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn1O88551 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn1O88551 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn1O88551 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn1O88551 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn1O88551 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn1O88551 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn1O88551 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn1O88551 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.2□□□□□ -0.14
Cldn1O88551 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cldn1O88551 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.2□□□□□ -0.14
Cldn1O88551 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn1O88551 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.2□□□□□ -0.14
Cldn1O88551 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Cldn1O88551 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn1O88551 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn1O88551 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn1O88551 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.2□□□□□ -0.14
Cldn1O88551 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn1O88551 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn1O88551 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.2□□□□□ -0.14
Cldn1O88551 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn1O88551 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn1O88551 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn1O88551 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn1O88551 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn1O88551 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn1O88551 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn1O88551 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn1O88551 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn1O88551 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn1O88551 Gm11594-201ENSMUST00000122313 162 ntBASIC14.19□□□□□ -0.14
Cldn1O88551 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.19□□□□□ -0.14
Cldn1O88551 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.19□□□□□ -0.14
Cldn1O88551 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn1O88551 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn1O88551 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.19□□□□□ -0.14
Cldn1O88551 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn1O88551 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn1O88551 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn1O88551 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cldn1O88551 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn1O88551 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.18□□□□□ -0.14
Cldn1O88551 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn1O88551 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn1O88551 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn1O88551 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn1O88551 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn1O88551 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn1O88551 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn1O88551 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cldn1O88551 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn1O88551 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.18□□□□□ -0.14
Cldn1O88551 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn1O88551 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn1O88551 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.18□□□□□ -0.14
Cldn1O88551 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.18□□□□□ -0.14
Cldn1O88551 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.18□□□□□ -0.14
Cldn1O88551 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn1O88551 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cldn1O88551 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cldn1O88551 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cldn1O88551 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn1O88551 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn1O88551 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn1O88551 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.18□□□□□ -0.14
Cldn1O88551 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn1O88551 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cldn1O88551 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cldn1O88551 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Cldn1O88551 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn1O88551 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn1O88551 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn1O88551 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn1O88551 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn1O88551 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn1O88551 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.17□□□□□ -0.14
Cldn1O88551 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn1O88551 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn1O88551 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn1O88551 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn1O88551 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.17□□□□□ -0.14
Cldn1O88551 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.17□□□□□ -0.14
Cldn1O88551 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn1O88551 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn1O88551 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn1O88551 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn1O88551 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn1O88551 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cldn1O88551 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn1O88551 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cldn1O88551 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms